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between years 1992 and 2017
 
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Jurij Jemec, Franjo Pernus, Bostjan Likar and Miran Buermen
2D sub-pixel point spread function measurement using a virtual point-like source
International Journal of Computer Vision, 121(3):391-402, 2017
[doi: 10.1007/s11263-016-0948-8]
[IF: 8.222 (2016); 3/133 computer science, artificial intelligence; 1st quartile]

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Hennadii Madan, Franjo Pernus, Bostjan Likar and Ziga Spiclin
A framework for automatic creation of gold-standard rigid 3D-2D registration datasets
International Journal of Computer Assisted Radiology and Surgery, 12(2):263-275, 2017
[doi: 10.1007/s11548-016-1482-4]
[IF: 1.863 (2016); 97/196 surgery; 2nd quartile]

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Peter Naglic, Franjo Pernus, Bostjan Likar and Miran Buermen
Adopting higher-order similarity relations for improved estimation of optical properties from subdiffusive reflectance
Optics Letters, 42(7):1357-1360, 2017
[doi: 10.1364/OL.42.001357]
[IF: 3.416 (2016); 14/92 optics; 1st quartile]

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Ziga Lesjak, Bostjan Likar, Franjo Pernus and Ziga Spiclin
Dolocitev optimalnih znacilnic za zaznavo sprememb bele mozganovine
Elektrotehniski vestnik, 84(3):85-92, 2017

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Guoyan Zheng, Chengwen Chu, Daniel L. Belavy, Bulat Ibragimov, Robert Korez, Tomaz Vrtovec, Hugo Hutt, Richard Everson, Judith Meakin, Isabel Lopez Andrade, Ben Glocker, Hao Chen, Qi Dou, Pheng-Ann Heng, Chunliang Wang, Daniel Forsberg, Ales Neubert, Jurgen Fripp, Martin Urschler, Darko Stern, Maria Wimmer, Alexey A. Novikov, Hui Cheng, Gabriele Armbrecht, Dieter Felsenberg and Shuo Li
Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data: a grand challenge
Medical Image Analysis, 35:327-344, 2017
[doi: 10.1016/j.media.2016.08.005]
[IF: 4.188 (2016); 8/105 computer science, interdisciplinary applications; 1st quartile]

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Andraz Mehle, Bostjan Likar and Dejan Tomazevic
In-line recognition of agglomerated pharmaceutical pellets with density-based clustering and convolutional neural network
IPSJ Transactions on Computer Vision and Applications, 9:7, 2017
[doi: 10.1186/s41074-017-0019-2]

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Peter Naglic, Franjo Pernus, Bostjan Likar and Miran Buermen
Lookup table-based sampling of the phase function for Monte Carlo simulations of light propagation in turbid media
Biomedical Optics Express, 8(3):1895-1910, 2017
[doi: 10.1364/BOE.8.001895]
[IF: 3.337 (2016); 15/92 optics; 1st quartile]

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Bulat Ibragimov, Robert Korez, Bostjan Likar, Franjo Pernus, Lei Xing and Tomaz Vrtovec
Segmentation of pathological structures by landmark-assisted deformable models
IEEE Transactions on Medical Imaging, 36(7):1457-1469, 2017
[doi: 10.1109/TMI.2017.2667578]
[IF: 3.942 (2016); 9/105 computer science, interdisciplinary applications; 1st quartile]

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Tom P.C. Schloesser, Michiel M.A. Janssen, Tom Hogervorst, Tomaz Vrtovec, John de Vos, F. Cumhur OEner and René M. Castelein
The odyssey of sagittal pelvic morphology during human evolution: a perspective on different hominoidae
The Spine Journal, 17(8):1202-1206, 2017
[doi: 10.1016/j.spinee.2017.03.016]
[IF: 2.962 (2016); 10/76 orthopedics; 1st quartile]

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Miha Vodicar, Robert Kosak, Matevz Gorensek, Robert Korez, Tomaz Vrtovec, Jadran Koder, Vane Antolic and Rok Vengust
Vertebral end plate perforation for intervertebral disc height preservation after single level lumbar discectomy: a randomized controlled trial
Clinical Spine Surgery, 30(6):E707-E712, 2017
[doi: 10.1097/BSD.0000000000000305]
[IF: 2.042 (2016); 25/76 orthopedics; 2nd quartile]

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Miran Buermen
Vpliv zmanjsanja simulacijskega volumna na napako in hitrost izracunov reflektance z metodo Monte Carlo
Elektrotehniski vestnik, 84(1-2):61-65, 2017

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Ching-Wei Wang, Cheng-Ta Huang, Jia-Hong Lee, Chung-Hsing Li, Sheng-Wei Chang, Ming-Jhih Siao, Tat-Ming Lai, Bulat Ibragimov, Tomaz Vrtovec, Olaf Ronneberger, Philipp Fischer, Tim F. Cootes and Claudia Lindner
A benchmark for comparison of dental radiography analysis algorithms
Medical Image Analysis, 31:63-76, 2016
[doi: 10.1016/j.media.2016.02.004]
[IF: 4.188 (2016); 8/105 computer science, interdisciplinary applications; 1st quartile]

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Jianhua Yao, Joseph E. Burns, Daniel Forsberg, Alexander Seitel, Abtin Rasoulian, Purang Abolmaesumi, Kerstin Hammernik, Martin Urschler, Bulat Ibragimov, Robert Korez, Tomaz Vrtovec, Isaac Castro-Mateos, Jose M. Pozo, Alejandro F. Frangi, Ronald M. Summers and Shuo Li
A multi-center milestone study of clinical vertebral CT segmentation
Computerized Medical Imaging and Graphics, 49:16-28, 2016
[doi: 10.1016/j.compmedimag.2015.12.006]
[IF: 1.738 (2016); 72/126 radiology, nuclear medicine & medical imaging; 3rd quartile]

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Tim Jerman, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Blob enhancement and visualization for improved intracranial aneurysm detection
IEEE Transactions on Visualization and Computer Graphics, 22(6):1705-1717, 2016
[doi: 10.1109/TVCG.2015.2446493]
[IF: 2.254 (2016); 14/106 computer science, sowtware engineering; 1st quartile]

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Dejan Knez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Computer-assisted screw size and insertion trajectory planning for pedicle screw placement surgery
IEEE Transactions on Medical Imaging, 35(6):1420-1430, 2016
[doi: 10.1109/TMI.2016.2514530]
[IF: 3.942 (2016); 9/105 computer science, interdisciplinary applications; 1st quartile]

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Jurij Jemec, Franjo Pernus, Bostjan Likar and Miran Buermen
Deconvolution-based restoration of SWIR pushbroom imaging spectrometer images
Optics Express, 24(21):24704-24718, 2016
[doi: 10.1364/OE.24.024704]
[IF: 3.307 (2016); 16/92 optics; 1st quartile]

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Dejan Knez, Janez Mohar, Robert J. Cirman, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Dolocanje velikosti in vstavitvene trajektorije pedikularnih vijakov v racunalniskotomografskih (CT) slikah deformacij prsne hrbtenice: primerjava rocnega in racunalnisko podprtega predoperacijskega nacrtovanja
Zdravniski vestnik, 85(11-12):619-631, 2016

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Tim Jerman, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Enhancement of vascular structures in 3D and 2D angiographic images
IEEE Transactions on Medical Imaging, 35(9):2107-2118, 2016
[doi: 10.1109/TMI.2016.2550102]
[IF: 3.942 (2016); 9/105 computer science, interdisciplinary applications; 1st quartile]

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Peter Naglic, Franjo Pernus, Bostjan Likar and Miran Buermen
Estimation of optical properties by spatially resolved reflectance spectroscopy in the subdiffusive regime
Journal of Biomedical Optics, 21(9):095003, 2016
[doi: 10.1117/1.JBO.21.9.095003]
[IF: 2.530 (2016); 40/126 radiology, nuclear medicine & medical imaging; 2nd quartile]

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Tom P.C. Schloesser, Michiel M.A. Janssen, Tomaz Vrtovec and René M. Castelein
Letter to the editor concerning ‘‘Pelvic incidence: an anatomic investigation of 880 cadaveric specimens’’ by Weinberg DS, Morris WZ, Gebhart JJ, Liu RW: Eur Spine J (2015), doi: 10.1007/s00586-015-4317-z
European Spine Journal, 25(9):3004-3005, 2016
[doi: 10.1007/s00586-015-4363-6]
[IF: 2.563 (2016); 18/76 orthopedics; 1st quartile]

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Blaz Cugmas and Peter Naglic
Obstojnost crnil v vodnih fantomih za uporabo z difuzno reflektancno spektroskopijo
Elektrotehniski vestnik, 83(3):93-98, 2016

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Andraz Mehle, Marko Bukovec, Bostjan Likar and Dejan Tomazevic
Print registration for automated visual inspection of transparent pharmaceutical capsules
Machine Vision and Applications, 27(7):1087-1102, 2016
[doi: 10.1007/s00138-016-0797-z]
[IF: 1.797 (2016); 9/22 computer science, cybernetics; 2nd quartile]

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Alfiia Galimzianova, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Stratified mixture modeling for segmentation of white-matter lesions in brain MR images
NeuroImage, 124(Part A):1031-1043, 2016
[doi: 10.1016/j.neuroimage.2015.09.047]
[IF: 5.835 (2016); 1/14 neuroimaging; 1st quartile]

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Ziga Lesjak, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Validation of white-matter lesion change detection methods on a novel publicly available MRI image database
Neuroinformatics, 14(4):403-420, 2016
[doi: 10.1007/s12021-016-9301-1]
[IF: 3.200 (2016); 17/105 computer science, interdisciplinary applications; 1st quartile]

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
A framework for automated spine and vertebrae interpolation-based detection and model-based segmentation
IEEE Transactions on Medical Imaging, 34(8):1649-1662, 2015
[doi: 10.1109/TMI.2015.2389334]
[IF: 3.756 (2015); 13/255 engineering, electrical & electronic; 1st quartile]

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Blaz Cugmas, Tanja Plavec, Maksimilijan Bregar, Peter Naglic, Franjo Pernus, Bostjan Likar and Miran Buermen
Detection of canine skin and subcutaneous tumors by visible and near-infrared diffuse reflectance spectroscopy
Journal of Biomedical Optics, 20(3):037003, 2015
[doi: 10.1117/1.JBO.20.3.037003]
[IF: 2.556 (2015); 21/90 optics; 1st quartile]

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Ching-Wei Wang, Cheng-Ta Huang, Meng-Che Hsieh, Chung-Hsing Li, Sheng-Wei Chang, Wei-Cheng Li, Rémy Vandaele, Raphaël Marée, Sébastien Jodogne, Pierre Geurts, Cheng Chen, Guoyan Zheng, Chengwen Chu, Hengameh Mirzaalian, Ghassan Hamarneh, Tomaz Vrtovec and Bulat Ibragimov
Evaluation and comparison of anatomical landmark detection methods for cephalometric X-ray images: a grand challenge
IEEE Transactions on Medical Imaging, 34(9):1890-1900, 2015
[doi: 10.1109/TMI.2015.2412951]
[IF: 3.756 (2015); 13/255 engineering, electrical & electronic; 1st quartile]

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Peter Naglic, Franjo Pernus, Bostjan Likar and Miran Buermen
Limitations of the commonly used simplified laterally uniform optical fiber probe-tissue interface in Monte Carlo simulations of diffuse reflectance
Biomedical Optics Express, 6(10):3973-3988, 2015
[doi: 10.1364/BOE.6.003973]
[IF: 3.344 (2015); 12/90 optics; 1st quartile]

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David Martincic, Miha Brojan, Franc Kosel, Darko Stern, Tomaz Vrtovec and Rok Vengust
Minimal cement volume for vertebroplasty
International Orthopaedics, 39(4):727-733, 2015
[doi: 10.1007/s00264-014-2620-7]
[IF: 2.387 (2015); 19/74 orthopedics; 2nd quartile]

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Maksimilijan Bregar, Blaz Cugmas, Peter Naglic, Daniela Hartmann, Franjo Pernus, Bostjan Likar and Miran Buermen
Properties of contact pressure induced by manually operated fiber-optic probes
Journal of Biomedical Optics, 20(12):127002, 2015
[doi: 10.1117/1.JBO.20.12.127002]
[IF: 2.556 (2015); 21/90 optics; 1st quartile]

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Blaz Bratanic, Franjo Pernus, Bostjan Likar and Dejan Tomazevic
Real-time pose estimation of rigid objects in heavily cluttered environments
Computer Vision and Image Understanding, 141:38-51, 2015
[doi: 10.1016/j.cviu.2015.09.002]
[IF: 2.134 (2015); 62/255 engineering, electrical & electronic; 1st quartile]

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Alfiia Galimzianova, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Robust estimation of unbalanced mixture models on samples with outliers
IEEE Transactions on Pattern Analysis and Machine Intelligence, 37(11):2273-2285, 2015
[doi: 10.1109/TPAMI.2015.2404835]
[IF: 6.077 (2015); 5/255 engineering, electrical & electronic; 1st quartile]

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Bulat Ibragimov, Jerry L. Prince, Emi Z. Murano, Jonghye Woo, Maureen Stone, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Segmentation of tongue muscles from super-resolution magnetic resonance images
Medical Image Analysis, 20(1):198-207, 2015
[doi: 10.1016/j.media.2014.11.006]
[IF: 4.565 (2015); 4/104 computer science, interdisciplinary applications; 1st quartile]

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Uros Mitrovic, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Simultaneous 3D–2D image registration and C-arm calibration: application to endovascular image-guided interventions
Medical Physics, 42(11):6433-6447, 2015
[doi: 10.1118/1.4932626]
[IF: 2.496 (2015); 41/124 radiology, nuclear medicine & medical imaging; 2nd quartile]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Variability of manual and computerized methods for measuring coronal vertebral inclination in computed tomography images
Image Analysis & Stereology, 34(3):199-208, 2015
[doi: 10.5566/ias.1334]
[IF: 0.500 (2015); 210/254 mathematics, applied; 4th quartile]

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Ziga Spiclin
Vrednotenje mer podobnosti med strukturnimi tenzorji za poravnavo 3D in 2D slik
Elektrotehniski vestnik, 82(1-2):66-72, 2015

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Maksimilijan Bregar, Miran Buermen, Uros Aljancic, Blaz Cugmas, Franjo Pernus and Bostjan Likar
Contact pressure-aided spectroscopy
Journal of Biomedical Optics, 19(2):020501, 2014
[doi: 10.1117/1.JBO.19.2.020501]
[IF: 2.859 (2014); 13/87 optics; 1st quartile]

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Tom P.C. Schloesser, Michiel M.A. Janssen, Tomaz Vrtovec, Franjo Pernus, F. Cumhur OEner, Max A. Viergever, Koen L. Vincken and René M. Castelein
Evolution of the ischio-iliac lordosis during natural growth and its relation with the pelvic incidence
European Spine Journal, 23(7):1433-1441, 2014
[doi: 10.1007/s00586-014-3358-z]
[IF: 2.066 (2014); 23/72 orthopedics; 1st quartile]

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Blaz Cugmas, Maksimilijan Bregar, Miran Buermen, Franjo Pernus and Bostjan Likar
Impact of contact pressure-induced spectral changes on soft-tissue classification in diffuse reflectance spectroscopy: problems and solutions
Journal of Biomedical Optics, 19(3):037002, 2014
[doi: 10.1117/1.JBO.19.3.037002]
[IF: 2.859 (2014); 13/87 optics; 1st quartile]

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Nika Oman Kadunc, Rok Sibanc, Rok Dreu, Bostjan Likar and Dejan Tomazeviè
In-line monitoring of pellet coating thickness growth by means of visual imaging
International Journal of Pharmaceutics, 470(1-2):8-14, 2014
[doi: 10.1016/j.ijpharm.2014.04.066]
[IF: 3.650 (2014); 56/255 pharmacology & pharmacy; 1st quartile]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Investigation of the reproducibility and reliability of sagittal vertebral inclination measurements from MR images of the spine
Computerized Medical Imaging and Graphics, 38(7):620-627, 2014
[doi: 10.1016/j.compmedimag.2014.04.005]
[IF: 1.218 (2014); 53/76 engineering, biomedical; 3rd quartile]

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Peter Usenik, Miran Buermen, Ales Fidler, Franjo Pernus and Bostjan Likar
Near-infrared hyperspectral imaging of water evaporation dynamics for early detection of incipient caries
Journal of Dentistry, 42(10):1242-1247, 2014
[doi: 10.1016/j.jdent.2014.08.007]
[IF: 2.749 (2014); 13/88 dentistry, oral surgery & medicine; 1st quartile]

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Robert Korez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Parametric modeling of the intervertebral disc space in 3D: application to CT images of the lumbar spine
Computerized Medical Imaging and Graphics, 38(7):596-605, 2014
[doi: 10.1016/j.compmedimag.2014.04.008]
[IF: 1.218 (2014); 53/76 engineering, biomedical; 3rd quartile]

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Jurij Jemec, Franjo Pernus, Bostjan Likar and Miran Buermen
Push-broom hyperspectral image calibration and enhancement by 2D deconvolution with a variant response function estimate
Optics Express, 22(22):27655-27668, 2014
[doi: 10.1364/OE.22.027655]
[IF: 3.488 (2014); 10/87 optics; 1st quartile]

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Blaz Bratanic, Franjo Pernus, Bostjan Likar and Dejan Tomazevic
Real-time rotation estimation using histograms of oriented gradients
PLOS ONE, 9(3):e92137, 2014
[doi: 10.1371/journal.pone.0092137]
[IF: 3.234 (2014); 9/57 multidisciplinary sciences; 1st quartile]

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Shape representation for efficient landmark-based segmentation in 3D
IEEE Transactions on Medical Imaging, 33(4):861-874, 2014
[doi: 10.1109/TMI.2013.2296976]
[IF: 3.390 (2014); 18/249 engineering, electrical & electronic; 1st quartile]

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Blaz Cugmas, Miran Buermen, Jurij Jemec, Franjo Pernus and Bostjan Likar
Towards automated detection of milk spot livers by diffuse reflectance spectroscopy
Journal of Food Engineering, 124:128-132, 2014
[doi: 10.1016/j.jfoodeng.2013.10.013]
[IF: 2.771 (2014); 19/123 food science & technology; 1st quartile]

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Uros Mitrovic, Ziga Spiclin, Bostjan Likar and Franjo Pernus
3D-2D registration of cerebral angiograms: a method and evaluation on clinical images
IEEE Transactions on Medical Imaging, 32(8):1550-1563, 2013
[doi: 10.1109/TMI.2013.2259844]
[IF: 3.799 (2013); 16/247 engineering, electrical & electronic; 1st quartile]

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
A method for characterizing illumination systems for hyperspectral imaging
Optics Express, 21(4):4841-4853, 2013
[doi: 10.1364/OE.21.004841]
[IF: 3.525 (2013); 6/83 optics; 1st quartile]

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Miha Mozina, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Automated visual inspection of imprint quality of pharmaceutical tablets
Machine Vision and Applications, 24(1):66-73, 2013
[doi: 10.1007/s00138-011-0366-4]
[IF: 1.444 (2013); 9/24 computer science, cybernetics; 2nd quartile]

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Matjaz Kosec, Miran Buermen, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Characterization of a spectrograph based hyperspectral imaging system
Optics Express, 21(10):12085-12099, 2013
[doi: 10.1364/OE.21.012085]
[IF: 3.525 (2013); 6/83 optics; 1st quartile]

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Tomaz Vrtovec, Michiel M.A. Janssen, Bostjan Likar, René M. Castelein, Max A. Viergever and Franjo Pernus
Evaluation of pelvic morphology in the sagittal plane
The Spine Journal, 13(11):1500-1509, 2013
[doi: 10.1016/j.spinee.2013.06.034]
[IF: 2.800 (2013); 11/67 orthopedics; 1st quartile]

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Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Manual and computerized measurement of coronal vertebral inclination in MRI images: a pilot study
Clinical Radiology, 68(8):807-814, 2013
[doi: 10.1016/j.crad.2013.03.008]
[IF: 1.663 (2013); 63/121 radiology, nuclear medicine & medical imaging; 3rd quartile]

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Blaz Cugmas, Miran Buermen, Maksimilijan Bregar, Franjo Pernus and Bostjan Likar
Pressure-induced near infrared spectra response as a valuable source of information for soft tissue classification
Journal of Biomedical Optics, 18(4):047002, 2013
[doi: 10.1117/1.JBO.18.4.047002]
[IF: 2.752 (2013); 17/83 optics; 1st quartile]

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Darko Stern, Vesna Njagulj, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Quantitative vertebral morphometry based on parametric modeling of vertebral bodies in 3D
Osteoporosis International, 24(4):1357-1368, 2013
[doi: 10.1007/s00198-012-2089-4]
[IF: 4.165 (2013); 30/123 endocrinology & metabolism; 1st quartile]

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
Radiometric calibration and noise estimation of acousto-optic tunable filter hyperspectral imaging systems
Applied Optics, 52(15):3526-3537, 2013
[doi: 10.1364/AO.52.003526]
[IF: 1.649 (2013); 29/83 optics; 2nd quartile]

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Michiel M.A. Janssen, Koen L. Vincken, Sjoerd M. van Raak, Tomaz Vrtovec, Bastiaan Kemp, Max A. Viergever, Lambertus W. Bartels and René M. Castelein
Sagittal spinal profile and spinopelvic balance in parents of scoliotic children
The Spine Journal, 13(12):1789-1800, 2013
[doi: 10.1016/j.spinee.2013.05.030]
[IF: 2.800 (2013); 11/67 orthopedics; 1st quartile]

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
A game-theoretic framework for landmark-based image segmentation
IEEE Transactions on Medical Imaging, 31(9):1761-1776, 2012
[doi: 10.1109/TMI.2012.2202915]
[IF: 4.027 (2012); 8/242 engineering, electrical & electronic; 1st quartile]

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Primoz Markelj, Dejan Tomazevic, Bostjan Likar and Franjo Pernus
A review of 3D/2D registration methods for image-guided interventions
Medical Image Analysis, 16(3):642-661, 2012
[doi: 10.1016/j.media.2010.03.005]
[IF: 4.087 (2012); 4/99 computer science, interdisciplinary applications; 1st quartile]

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Tomaz Vrtovec, Michiel M.A. Janssen, Bostjan Likar, René M. Castelein, Max A. Viergever and Franjo Pernus
A review of methods for evaluating the quantitative parameters of sagittal pelvic alignment
The Spine Journal, 12(5):433-446, 2012
[doi: 10.1016/j.spinee.2012.02.013]
[IF: 3.355 (2012); 3/63 orthopedics; 1st quartile]

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Tomaz Vrtovec, Michiel M. A. Janssen, Franjo Pernus, René M. Castelein and Max A. Viergever
Analysis of pelvic incidence from three-dimensional images of a normal population
Spine, 37(8):E479-E485, 2012
[doi: 10.1097/BRS.0b013e31823770af]
[IF: 2.159 (2012); 17/63 orthopedics; 2nd quartile]

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Peter Usenik, Miran Buermen, Ales Fidler, Franjo Pernus and Bostjan Likar
Automated classification and visualization of healthy and diseased hard dental tissues by near-infrared hyperspectral imaging
Applied Spectroscopy, 66(9):1067-1074, 2012
[doi: 10.1366/11-06460]
[IF: 1.942 (2012); 10/57 instruments & instrumentation; 1st quartile]

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Matjaz Kosec, Miran Buermen, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Automated model based calibration of short-wavelength infrared (SWIR) imaging spectrographs
Applied Spectroscopy, 66(10):1128-1135, 2012
[doi: 10.1366/12-06618]
[IF: 1.942 (2012); 10/57 instruments & instrumentation; 1st quartile]

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Ziga Spiclin, Bostjan Likar and Franjo Pernus
Groupwise registration of multi-modal images by an efficient joint entropy minimization scheme
IEEE Transactions on Image Processing, 21(5):2546-2558, 2012
[doi: 10.1109/TIP.2012.2186145]
[IF: 3.199 (2012); 17/242 engineering, electrical & electronic; 1st quartile]

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Multi-feature mutual information image registration
Image Analysis & Stereology, 31(1):43-53, 2012
[doi: 10.5566/ias.v31.p43-53]
[IF: 0.639 (2012); 14/23 imaging science & photographic technology; 3rd quartile]

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Tomaz Vrtovec, Michiel M.A. Janssen, Franjo Pernus, René M. Castelein and Max A. Viergever
Pelvic incidence: analysis in three dimensions
Journal of Bone and Joint Surgery, British Volume, 94-B(suppl. XLIV):107, 2012
[IF: 2.689 (2012); 31/198 surgery; 1st quartile]

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Peter Usenik, Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Automated tracking and analysis of phospholipid vesicle contours in phase contrast microscopy images
Medical & Biological Engineering & Computing, 49(8):957-966, 2011
[doi: 10.1007/s11517-011-0789-0]
[IF: 1.878 (2011); 25/99 computer science, interdisciplinary applications; 2nd quartile]

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Ziga Spiclin, Marko Bukovec, Franjo Pernus and Bostjan Likar
Image registration for visual inspection of imprinted pharmaceutical tablets
Machine Vision and Applications, 22(1):197-206, 2011
[doi: 10.1007/s00138-007-0104-0]
[IF: 1.009 (2011); 125/244 engineering, electrical & electronic; 3rd quartile]

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Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Manual and computerized measurement of sagittal vertebral inclination in computed tomography images
Spine, 36(13):E875-E881, 2011
[doi: 10.1097/BRS.0b013e3181fe0aab]
[IF: 2.078 (2011); 20/63 orthopedics; 2nd quartile]

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Darko Stern, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Parametric modelling and segmentation of vertebral bodies in 3D CT and MR spine images
Physics in Medicine and Biology, 56(23):7505-7522, 2011
[doi: 10.1088/0031-9155/56/23/011]
[IF: 2.829 (2011); 14/72 engineering, biomedical; 1st quartile]

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Miha Mozina, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Real-time image segmentation for visual inspection of pharmaceutical tablets
Machine Vision and Applications, 22(1):145-156, 2011
[doi: 10.1007/s00138-009-0218-7]
[IF: 1.009 (2011); 125/244 engineering, electrical & electronic; 3rd quartile]

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Marko Bukovec, Bostjan Likar and Franjo Pernus
Segmentation of anatomical structures by connected statistical models
Image Analysis & Stereology, 30(2):77-88, 2011
[doi: 10.5566/ias.v30.p77-88]

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Miran Buermen, Franjo Pernus and Bostjan Likar
Spectral characterization of near-infrared acousto-optic tunable filter (AOTF) hyperspectral imaging systems using standard calibration materials
Applied Spectroscopy, 65(4):393-401, 2011
[doi: 10.1366/10-05987]
[IF: 1.663 (2011); 15/58 instruments & instrumentation; 2nd quartile]

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Supriyanto Pawiro, Primoz Markelj, Franjo Pernus, Christelle Gendrin, Michael Figl, Christoph Weber, Franz Kainberger, Iris Noebauer-Huhmann, Helga Bergmeister, Markus Stock, Dietmar Georg, Helmar Bergmann and Wolfgang Birkfellner
Validation for 2D/3D registration I: a new gold standard data set
Medical Physics, 38(3):1481 (10), 2011
[doi: 10.1118/1.3553402]
[IF: 2.830 (2011); 29/116 radiology, nuclear medicine & medical imaging; 1st quartile]

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Christelle Gendrin, Primoz Markelj, Supriyanto Pawiro, Jakob Spoerk, Christoph Bloch, Christoph Weber, Michael Figl, Helmar Bergmann, Wolfgang Birkfellner, Bostjan Likar and Franjo Pernus
Validation for 2D/3D registration II: the comparison of intensity- and gradient-based merit functions using a new gold standard data set
Medical Physics, 38(3):1491 (12), 2011
[doi: 10.1118/1.3553403]
[IF: 2.830 (2011); 29/116 radiology, nuclear medicine & medical imaging; 1st quartile]

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
A survey of mobile robots for distribution power line inspection
IEEE Transactions on Power Delivery, 25(1):485-493, 2010
[doi: 10.1109/TPWRD.2009.2035427]
[IF: 1.208 (2010); 101/247 engineering, electrical & electronic; 2nd quartile]

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Tomaz Vrtovec, Rok Vengust, Bostjan Likar and Franjo Pernus
Analysis of four manual and a computerized method for measuring axial vertebral rotation in computed tomography images
Spine, 35(12):E535-E541, 2010
[doi: 10.1097/BRS.0b013e3181cb8d2b]
[IF: 2.510 (2010); 10/61 orthopedics; 1st quartile]

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Darko Stern, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Automated detection of spinal centrelines, vertebral bodies and intervertebral discs in CT and MR images of lumbar spine
Physics in Medicine and Biology, 55(1):247-264, 2010
[doi: 10.1088/0031-9155/55/1/015]
[IF:  3.056 (2010); 11/69 engineering, biomedical; 1st quartile]

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
Deconvolution in acousto-optical tunable filter spectrometry
Applied Spectroscopy, 64(11):1265-1273, 2010
[doi: 10.1366/000370210793334945]
[IF: 1.729 (2010); 15/61 instruments & instrumentation; 2nd quartile]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Determination of axial vertebral rotation in MR images: comparison of four manual and a computerized method
European Spine Journal, 19(5):774-781, 2010
[doi: 10.1007/s00586-010-1340-y]
[IF: 1.994 (2010); 20/61 orthopedics; 2nd quartile]

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Miha Mozina, Dejan Tomazevic, Stanko Leben, Franjo Pernus and Bostjan Likar
Digital imaging as a process analytical technology tool for fluid-bed pellet coating process
European Journal of Pharmaceutical Sciences, 41(1):156-162, 2010
[doi: 10.1016/j.ejps.2010.06.001]
[IF: 3.291 (2010); 68/249 pharmacology & pharmacy; 2nd quartile]

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Michael Figl, Christoph Bloch, Christelle Gendrin, Christoph Weber, Supriyanto Pawiro, Johann Hummel, Primoz Markelj, Franjo Pernus, Helmar Bergmann and Wolfgang Birkfellner
Efficient implementation of the rank correlation merit function for 2D/3D registration
Physics in Medicine and Biology, 55(19):N465-N471, 2010
[doi: 10.1088/0031-9155/55/19/N01]
[IF: 3.056 (2010); 11/69 engineering, biomedical; 1st quartile]

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Ziga Spiclin, Jaka Katrasnik, Miran Buermen, Franjo Pernus and Bostjan Likar
Geometric calibration of a hyperspectral imaging system
Applied Optics, 49(15):2813–2818, 2010
[doi: 10.1364/AO.49.002813]
[IF: 1.703 (2010); 30/70 optics; 2nd quartile]

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Jaka Katrasnik, Miran Buermen, Franjo Pernus and Bostjan Likar
Spectral characterization and calibration of AOTF spectrometers and hyper-spectral imaging systems
Chemometrics and Intelligent Laboratory Systems, 101(1):23-29, 2010
[doi: 10.1016/j.chemolab.2009.11.012]
[IF: 2.222 (2010); 7/92 mathematics, interdisciplinary applications; 1st quartile]

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Primoz Markelj, Bostjan Likar and Franjo Pernus
Standardized evaluation methodology for 3D/2D registration based on the Visible Human data set
Medical Physics, 37(9):4643-4647, 2010
[doi: 10.1118/1.3476414]
[IF: 3.070 (2010); 27/111 radiology, nuclear medicine & medical imaging; 1st quartile]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
A review of methods for quantitative evaluation of axial vertebral rotation
European Spine Journal, 18(8):1079-1090, 2009
[doi: 10.1007/s00586-009-0914-z]
[IF: 1.956 (2009); 14/56 orthopedics; 1st quartile]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
A review of methods for quantitative evaluation of spinal curvature
European Spine Journal, 18(5):593-607, 2009
[doi: 10.1007/s00586-009-0913-0]
[IF: 1.956 (2009); 14/56 orthopedics; 1st quartile]

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Miran Buermen, Franjo Pernus and Bostjan Likar
High-speed precision weighing of pharmaceutical capsules
Measurement Science and Technology, 20(11):115203, 2009
[doi: 10.1088/0957-0233/20/11/115203]
[IF: 1.317 (2009); 47/192 engineering, multidisciplinary; 1st quartile]

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Darko Skerl, Bostjan Likar and Franjo Pernus
A protocol for evaluation of similarity measures for non-rigid registration
Medical Image Analysis, 12(1):42-54, 2008
[doi: 10.1016/j.media.2007.06.001]
[IF: 3.602 (2008); 4/98 computer science, interdisciplinary applications; 1st quartile]

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Miran Buermen, Franjo Pernus and Bostjan Likar
LED light sources: a survey of quality-affecting factors and methods for their assessment
Measurement Science and Technology, 19(12):122002, 2008
[doi: 10.1088/0957-0233/19/12/122002]
[IF: 1.493 (2008); 28/176 engineering, multidisciplinary; 1st quartile]

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Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Quantitative analysis of spinal curvature in 3D: application to CT images of normal spine
Physics in Medicine and Biology, 53(7):1895-1908, 2008
[doi: 10.1088/0031-9155/53/7/006]
[IF: 2.784 (2008); 10/51 engineering, biomedical; 1st quartile]

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Primoz Markelj, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Robust 3-D/2-D registration of CT and MR to X-ray images based on gradient reconstruction
International Journal of Computer Assisted Radiology and Surgery, 3(6):477-484, 2008
[doi: 10.1007/s11548-008-0244-3]
[IF: 1.481 (2011); 89/199 surgery; 2nd quartile]

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Primoz Markelj, Dejan Tomazeviè, Franjo Pernus and Bostjan Likar
Robust gradient-based 3-D/2-D registration of CT and MR to X-ray images
IEEE Transactions on Medical Imaging, 27(12):1704-1714, 2008
[doi: 10.1109/TMI.2008.923984]
[IF: 4.004 (2008); 1/98 computer science, interdisciplinary applications; 1st quartile]

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Uros Vovk, Franjo Pernus and Bostjan Likar
A review of methods for correction of intensity inhomogeneity in MRI
IEEE Transactions on Medical Imaging, 26(3):405-421, 2007
[doi: 10.1109/TMI.2006.891486]
[IF: 3.275 (2007); 1/11 imaging science & photographic technology; 1st quartile]

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Miran Buermen, Franjo Pernus and Bostjan Likar
Accelerated estimation of spectral degradation of white GaN-based LEDs
Measurement Science and Technology, 18(1):230-238, 2007
[doi: 10.1088/0957-0233/18/1/029]
[IF: 1.297 (2007); 10/67 engineering, multidisciplinary; 1st quartile]

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Tomaz Vrtovec, Sébastien Ourselin, Lavier Gomes, Bostjan Likar and Franjo Pernus
Automated generation of curved planar reformations from MR images of the spine
Physics in Medicine and Biology, 52(10):2865-2878, 2007
[doi: 10.1088/0031-9155/52/10/015]
[IF: 2.528 (2007); 9/44 engineering, biomedical; 1st quartile]

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Marko Bukovec, Ziga Spiclin, Franjo Pernus and Bostjan Likar
Automated visual inspection of imprinted pharmaceutical tablets
Measurement Science and Technology, 18(9):2921-2930, 2007
[doi: 10.1088/0957-0233/18/9/023]
[IF: 1.297 (2007); 10/67 engineering, multidisciplinary; 1st quartile]

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Darko Skerl, Bostjan Likar, Michael J. Fitzpatrick and Franjo Pernus
Comparative evaluation of similarity measures for the rigid registration of multi-modal head images
Physics in Medicine and Biology, 52(18):5587-5601, 2007
[doi: 10.1088/0031-9155/52/18/008]
[IF: 2.528 (2007); 9/44 engineering, biomedical; 1st quartile]

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Ales Fidler, Uros Skaleric and Bostjan Likar
The effect of image content on detail preservation and file size reduction in lossy compression
Dentomaxillofacial Radiology, 36(7):387-392, 2007
[doi: 10.1259/dmfr/66171128]
[IF: 0.899 (2007); 74/87 radiology, nuclear medicine & medical imaging; 4th quartile]

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
3-D/2-D registration by integrating 2-D information in 3-D
IEEE Transactions on Medical Imaging, 25(1):17-27, 2006
[doi: 10.1109/TMI.2005.859715]
[IF: 3.757 (2006); 1/11 imaging science & photographic technology; 1st quartile]

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Darko Skerl, Bostjan Likar and Franjo Pernus
A protocol for evaluation of similarity measures for rigid registration
IEEE Transactions on Medical Imaging, 25(6):779-791, 2006
[doi: 10.1109/TMI.2006.874963]
[IF: 3.757 (2006); 1/11 imaging science & photographic technology; 1st quartile]

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Miran Buermen, Franjo Pernus and Bostjan Likar
Automated optical quality inspection of light emitting diodes
Measurement Science and Technology, 17(6):1372-1378, 2006
[doi: 10.1088/0957-0233/17/6/013]
[IF: 1.228 (2006); 12/66 engineering, multidisciplinary; 1st quartile]

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Darko Skerl, Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Evaluation of similarity measures for reconstruction-based registration in image-guided radiotherapy and surgery
International Journal of Radiation Oncology*Biology*Physics, 65(3):943-953, 2006
[doi: 10.1016/j.ijrobp.2006.03.005]
[IF: 4.463 (2006); 7/85 radiology, nuclear medicine & medical imaging; 1st quartile]

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Uros Vovk, Franjo Pernus and Bostjan Likar
Intensity inhomogeneity correction of multispectral MR images
NeuroImage, 32(1):54-61, 2006
[doi: 10.1016/j.neuroimage.2006.03.020]
[IF: 5.559 (2006); 1/13 neuroimaging; 1st quartile]

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Ales Fidler, Bostjan Likar and Uros Skaleric
Lossy JPEG compression: easy to compress, hard to compare
Dentomaxillofacial Radiology, 35(2):67-73, 2006
[doi: 10.1259/dmfr/52842661]
[IF: 0.821 (2006); 128/182 surgery; 3rd quartile]

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Klemen Bohinc, Darko Lombardo, Veronika Kralj-Iglic, Miha Fosnaric, Sylvio May, Franjo Pernus, Henry Haegerstrand and Ales Iglic
Shape variation of bilayer membrane daughter vesicles induced by anisotropic membrane inclusions
Cellular and Molecular Biology Letters, 11(1):90-101, 2006
[doi: 10.2478/s11658-006-0009-3]

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Ales Fidler, Uros Skaleric and Bostjan Likar
The impact of image information on compressibility and degradation in medical image compression
Medical Physics, 33(8):2832-2838, 2006
[doi: 10.1118/1.2218316]
[IF: 3.571 (2006); 13/85 radiology, nuclear medicine & medical imaging; 1st quartile]

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>>
 
Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Automated curved planar reformation of 3D spine images
Physics in Medicine and Biology, 50(19):4527-4540, 2005
[doi: 10.1088/0031-9155/50/19/007]
[IF: 2.683 (2005); 6/41 engineering, biomedical; 1st quartile]

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Tomaz Vrtovec
Curved planar reformation of CT spine images
Elektrotehniski vestnik - Electrotechnical Review, 72:285-290, 2005

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Everine B. van de Kraats, Greame P. Penney, Dejan Tomazevic, Theo van Walsum and Wiro J. Niessen
Standardized evaluation methodology for 2-D-3-D registration
IEEE Transactions on Medical Imaging, 24(9):1177-1189, 2005
[doi: 10.1109/TMI.2005.853240]
[IF: 3.939 (2005); 1/12 imaging science & photographic technology; 1st quartile]

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Tomaz Vrtovec, Dejan Tomazevic, Bostjan Likar, Ludvik Travnik and Franjo Pernus
Automated construction of 3D statistical shape models
Image Analysis & Stereology, 23(2):111-120, 2004
[doi: 10.5566/ias.v23.p111-120]

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Uros Vovk
Correction of dynamic intensity inhomogeneity in MR images (Odpravljanje dinamiènih svetlostnih nehomogenosti v MR slikah)
Elektrotehniski vestnik - Electrotechnical Review, 71:243-248, 2004

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Gold standard data for evaluation and comparison of 3D/2D registration methods
Computer Aided Surgery, 9(4):137-144, 2004
[doi: 10.1080/10929080500097687]

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Uros Vovk, Franjo Pernus and Bostjan Likar
MRI intensity inhomogeneity correction by combining intensity and spatial information
Physics in Medicine and Biology, 49(17):4119-4133, 2004
[doi: 10.1088/0031-9155/49/17/020]
[IF: 2.368 (2004); 7/42 engineering, biomedical; 1st quartile]

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Dejan Stojakovic, Rok Bernard, Franjo Pernus and Bostjan Likar
Zajemanje svetlostno homogene in barvno kontrastne slike s pomocjo nastavljivega svetila
Elektrotehniski vestnik - Electrotechnical Review, 71:1-6, 2004

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Dejan Tomazevic, Bostjan Likar, Tomaz Slivnik and Franjo Pernus
3-D/2-D registration of CT and MR to X-ray images
IEEE Transactions on Medical Imaging, 22(11):1407-1416, 2003
[doi: 10.1109/TMI.2003.819277]

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Joze Derganc, Bostjan Likar and Franjo Pernus
A machine vision system for measuring the eccentricity of bearings
Computers in Industry, 50(1):103-111, 2003
[doi: 10.1016/S0166-3615(02)00141-0]

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Joze Derganc, Bostjan Likar, Rok Bernard, Dejan Tomazevic and Franjo Pernus
Real-time automated visual inspection of color tablets in pharmaceutical blisters
Real-Time Imaging, 9(2):113-124, 2003
[doi: 10.1016/S1077-2014(03)00018-4]

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Ales Fidler, Bostjan Likar, Franjo Pernus and Uros Skaleric
Comparative evaluation of JPEG and JPEG2000 compression in quantitative digital subtraction radiography
Dentomaxillofacial Radiology, 31(6):371-384, 2002
[doi: 10.1038/sj.dmfr.4600724]

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Comparative evaluation of retrospective shading correction methods
Journal of Microscopy, 208(3):212-223, 2002
[doi: 10.1046/j.1365-2818.2002.01079.x]

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Ales Fidler, Bostjan Likar, Franjo Pernus and Uros Skaleric
Impact of JPEG lossy image compression on quantitative digital subtraction radiography
Dentomaxillofacial Radiology, 31(2):106-112, 2002
[doi: 10.1038/sj.dmfr.4600670]

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Franci Lahajnar, Rok Bernard, Franjo Pernus and Stansilav Kovacic
Machine vision system for inspecting electric plates
Computers in Industry, 47(1):113-122, 2002
[doi: 10.1016/S0166-3615(01)00134-8]

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Bostjan Likar and Franjo Pernus
A hierarchical approach to elastic registration based on mutual information
Image and Vision Computing, 19(1-2):33-44, 2001
[doi: 10.1016/S0262-8856(00)00053-6]

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Rok Bernard, Masa Kanduser and Franjo Pernus
Model-based automated detection of mammalian cell colonies
Physics in Medicine and Biology, 46(11):3061-3072, 2001
[doi: 10.1088/0031-9155/46/11/320]

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Bostjan Likar, Max A. Viergever and Franjo Pernus
Retrospective correction of MR intensity inhomogeneity by information minimization
IEEE Transactions on Medical Imaging, 20(12):1398-1410, 2001
[doi: 10.1109/42.974934]

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Ales Fidler, Bostjan Likar, Franjo Pernus and Uros Skaleric
Influence of developer exhaustion on accuracy of quantitative digital subtraction radiography: an in vitro study
Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontics, 90(2):233-239, 2000
[doi: 10.1067/moe.2000.107362]

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Bostjan Likar, J.B. Antoine Maintz, Max A. Viergever and Franjo Pernus
Retrospective shading correction based on entropy minimization
Journal of Microscopy, 197(3):285-295, 2000
[doi: 10.1046/j.1365-2818.2000.00669.x]

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Rok Vengust, Matej Drobnik, Matej Daniel, Vane Antolic, Franjo Pernus, Ales Iglic and Veronika Kralj-Iglic
Role of magnification of standard anterior-posterior radiographs in determination of contact hip joint stress: short communication
Fángshí gaeongchéng (Journal of Chinese Corrosion Engineering), 12(5):30-32, 2000

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Ales Fidler, Bostjan Likar, Franjo Pernus and Uros Skaleric
Vpliv dolgotrajnosti razvijalca na natancnost digitalne subtrakcijske radiografije
Zobozdravstveni vestnik, 55:67-72, 2000

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Bostjan Likar and Franjo Pernus
Automatic extraction of corresponding points for the registration of medical images
Medical Physics, 26(8):1678-1686, 1999
[doi: 10.1118/1.598660]

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Joze Derganc and Franjo Pernus
Kontrola kakovosti lezajev elektricnega stevca z racunalniskim vidom
Elektrotehniski vestnik - Electrotechnical Review, 66:292-298, 1999

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Bostjan Likar and Franjo Pernus
Registration of serial transverse sections of muscle fibers
Cytometry, 37(2):93-106, 1999
[doi: 10.1002/(SICI)1097-0320(19991001)37:2<93::AID-CYTO2>3.0.CO;2-#]

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Ales Klemencic, Stansilav Kovacic and Franjo Pernus
Automated segmentation of muscle fiber images using active contour models
Cytometry, 32(4):317-326, 1998
[doi: 10.1002/(SICI)1097-0320(19980801)32:4<317::AID-CYTO9>3.0.CO;2-E]

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Stanislav Kovacic, Ales Leonardis and Franjo Pernus
Planning sequences of views for 3-D object recognition and pose determination
Pattern Recognition, 31(10):1407-1417, 1998
[doi: 10.1016/S0031-3203(98)00012-0 ]

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Bostjan Likar and Franjo Pernus
Evaluation of three contrast correction methods for digital subtraction in dental radiography: an in vitro study
Medical Physics, 24(2):299-307, 1997
[doi: 10.1118/1.598073]

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Vita Cebasek, Franjo Pernus, Slavko Obreza, Marko Ambroz and Ida Erzen
Energy metabolism of fibre types within fascicles of human muscles
Pfluegers Archiv - European Journal of Physiology, 431(6 Suppl):R211-R212, 1996
[doi: 10.1007/BF02346343]

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Ludvik Travnik, Franjo Pernus and Ida Erzen
Histochemical and morphometric characteristics of the normal human vastus medialis longus and vastus medialis obliquus muscles
Journal of Anatomy, 187(2):403-411, 1995

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Uros Petkovic, Robert Korez, Stefan Parent, Samuel Kadoury and Tomaz Vrtovec
3D Cobb angle measurements from scoliotic mesh models with varying face-vertex density
Proceedings of the 5th MICCAI Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging - MICCAI-MSKI2016, B. Glocker et al. (Eds.), Sep 10, Québec City, Canada, 46-55, 2017

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Hennadii Madan, Franjo Pernus and Ziga Spiclin
Benchmarking quantitative imaging biomarker measurement methods without a gold standard
Proceedings of the 20th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, M. Descoteaux et al. (Eds.), 10-14 Sep, Québec City, Canada, Lecture Notes in Computer Science 10434:763-771, 2017
[doi: 10.1007/978-3-319-66185-8_86]

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Peter Naglic, Franjo Pernus, Bostjan Likar and Miran Buermen
Estimation of optical properties from subdiffusive reflectance beyond the second similarity parameter γ
SPIE, Diffuse Optical Spectroscopy and Imaging VI, H. Dehghani, H. Wabnitz (Eds.), 10412:1041205 , 2017
[doi:  10.1117/12.2286344]

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Intervertebral disc segmentation in MR images with 3D convolutional networks
SPIE Medical Imaging 2017, Image Processing, 11 - 16 Feb, Orlando FL, USA, M.A. Styner, E.D. Angelini (Eds.), 10133:1013306, 2017
[doi: 10.1117/12.2254069]

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Hennadii Madan, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Regression without truth with Markov chain Monte-Carlo
SPIE Medical Imaging 2017, Image Perception, Observer Performance, and Technology Assessment, 11 - 16 Feb, Orlando FL, USA, M.A. Kupinski, R.M. Nishikawa (Eds.), 10136:101360K, 2017
[doi: 10.1117/12.2255880]

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Robert Korez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Segmentation of pathological spines in CT images using a two-way CNN and a collision-based model
Proceedings of the 5th MICCAI Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging - MICCAI-MSKI2016, B. Glocker et al. (Eds.), Sep 10, Québec City, Canada, 91-103, 2017

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Uros Petkovic, Robert Korez and Tomaz Vrtovec
Semi-automated measurement of the Cobb angle from 3D mesh models of the scoliotic spine
10th International Symposium on Image and Signal Processing and Analysis - ISPA 2017, Sep 18-20, Ljubljana, Slovenia, 2017

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Matic Ivancic, Peter Naglic, Bostjan Likar, Franjo Pernus and Miran Buermen
The role of numerical aperture in efficient estimation of spatially resolved reflectance by a Monte Carlo light propagation model
SPIE Photonics West 2017, Optical Interactions with Tissue and Cells XXVIII, 28 Jan - 2 Feb, San Francisco CA, USA, E.D. Jansen, H.T. Beier (Eds.), 10062:100621B, 2017
[doi: 10.1117/12.2252541]

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Accurate landmark-based segmentation by incorporating landmark misdetections
2016 IEEE Symposium on Biomedical Imaging: From Nano to Macro - ISBI 2016, 12-16 Apr, Prague, Czech Republic, J. Kybic, M. Sonka (Eds.), 1072-1075, 2016
[doi: 10.1109/ISBI.2016.7493451]

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Jurij Jemec, Franjo Pernus, Bostjan Likar and Miran Buermen
Along-track calibration of SWIR push-broom hyperspectral imaging system
SPIE Defense + Commercial Sensing 2016, Hyperspectral Imaging Sensors: Innovative Applications and Sensor Standards 2016, 17-21 Apr, Baltimore, MD, USA, D.P. Bannon (Ed.), 9860:98600H, 2016
[doi: 10.1117/12.2223800]

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Dejan Knez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Automated determination of pedicle morphometry in the thoracic spine
2016 IEEE Symposium on Biomedical Imaging: From Nano to Macro - ISBI 2016, 12-16 Apr, Prague, Czech Republic, J. Kybic, M. Sonka (Eds.), 664-667, 2016
[doi: 10.1109/ISBI.2016.7493354]

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Dejan Knez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Automated pedicle screw size and trajectory planning by maximization of fastening strength
Computational Methods and Clinical Applications for Spine Imaging, Third International Workshop and Challenge, CSI 2015, held in conjunction with the 18th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2015, Lecture Notes in Computer Science 9402:3-13, 2016
[doi: 10.1007/978-3-319-41827-8_1]

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Dejan Knez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Avtomatska metoda nacrtovanja velikosti in trajektorije pedikularnih vijakov
Racunalniska obdelava slik in njena uporaba v Sloveniji - 11. strokovna konferenca - ROSUS 2016, 17. marec, Maribor, Slovenija, B. Potocnik (ur.), 55-68, 2016

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William Mandel, Robert Korez, Marie-Lyne Nault, Stefan Parent and Samuel Kadoury
Classification of progressive and non-progressive scoliosis patients using discriminant manifolds
Proceedings of the 4th MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI2016, J. Yao et al. (Eds.), Oct 17, Athens, Greece, 98-108, 2016

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William Mandel, Robert Korez, Marie-Lyne Nault, Stefan Parent and Samuel Kadoury
Classification of Progressive and Non-progressive Scoliosis Patients Using Discriminant Manifolds
Computational Methods and Clinical Applications for Spine Imaging, Fourth International Workshop and Challenge, CSI 2016, held in conjunction with the 19th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2016, Lecture Notes in Computer Science 10182:135-145, 2016
[doi: 10.1007/978-3-319-55050-3_13]

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Tim Jerman, Alfiia Galimzianova, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Combining unsupervised and supervised methods for lesion segmentation
Proceedings of the 1st BrainLes International Workshop held at the 18th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2015, Lecture Notes in Computer Science 9556:45-56, 2016
[doi: 10.1007/978-3-319-30858-6_5]

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Deformable model-based segmentation of intervertebral discs from MR spine images by using the SSC descriptor
Computational Methods and Clinical Applications for Spine Imaging, Third International Workshop and Challenge, CSI 2015, held in conjunction with the 18th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2015, Lecture Notes in Computer Science 9402:117-124, 2016
[doi: 10.1007/978-3-319-41827-8_11]

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Matic Ivancic, Peter Naglic, Peter Usenik, Ales Fidler, Franjo Pernus, Bostjan Likar and Miran Buermen
Extraction of optical properties from hyperspectral images by Monte Carlo light propagation model
SPIE Photonics West 2016, Optical Interactions with Tissue and Cells XXVII, Tissue Optics and Optical Properties of Tissue III, 13-18 Feb, San Francisco CA, USA, E.D. Jansen (Ed.), 9706:97061A, 2016
[doi: 10.1117/12.2212807]

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Peter Naglic, Franjo Pernus, Bostjan Likar and Miran Buermen
Extraction of optical properties in the sub-diffuse regime by spatially resolved reflectance spectroscopy
SPIE Photonics West 2016, Optical Interactions with Tissue and Cells XXVII, Tissue Optics and Optical Properties of Tissue IV, 13-18 Feb, San Francisco CA, USA, E.D. Jansen (Ed.), 9706:97061C, 2016
[doi: 10.1117/12.2212947]

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Robert Korez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Joint detection and segmentation of vertebral bodies in CT images by sparse representation error minimization
SPIE Medical Imaging 2016, Image Processing, 27 Feb - 3 Mar, San Diego CA, USA, M.A. Styner, E.D. Angelini (Eds.), 9784:97842Y, 2016
[doi: 10.1117/12.2217087]

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Dejan Knez, Janez Mohar, Robert J. Cirman, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Manual and computer-assisted pedicle screw placement plans: a quantitative comparison
Proceedings of the 4th MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI2016, J. Yao et al. (Eds.), Oct 17, Athens, Greece, 78-88, 2016

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Dejan Knez, Janez Mohar, Robert J. Cirman, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Manual and computer-assisted pedicle screw placement plans: a quantitative comparison
Computational Methods and Clinical Applications for Spine Imaging, Fourth International Workshop and Challenge, CSI 2016, held in conjunction with the 19th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2016, Lecture Notes in Computer Science 10182:105-115, 2016
[doi: 10.1007/978-3-319-55050-3_10]

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Robert Korez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Model-based segmentation of vertebral bodies from MR images with 3D CNNs
Proceedings of the 19th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2016, S. Ourselin et al. (Eds.), 17-21 Oct, Athens, Greece, Lecture Notes in Computer Science 9901:433-441, 2016
[doi: 10.1007/978-3-319-46723-8_50]

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Dejan Knez, Janez Mohar, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Quantitative comparison between the straight-forward and anatomical insertion technique for pedicle screw placement
SPIE Medical Imaging 2016, Image Processing, 27 Feb - 3 Mar, San Diego CA, USA, M.A. Styner, E.D. Angelini (Eds.), 9784:978439, 2016
[doi: 10.1117/12.2216028]

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Robert Korez, Benjamin Aubert, Thierry Cresson, Stefan Parent, Tomaz Vrtovec, Jacques de Guise and Samuel Kadoury
Sparse and multi-object pose+shape modeling of the three-dimensional scoliotic spine
2016 IEEE Symposium on Biomedical Imaging: From Nano to Macro - ISBI 2016, 12-16 Apr, Prague, Czech Republic, J. Kybic, M. Sonka (Eds.), 225-228, 2016
[doi: 10.1109/ISBI.2016.7493250]

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Maksimilijan Bregar, Blaz Cugmas, Franjo Pernus, Bostjan Likar and Miran Buermen
A study on the properties of contact pressure induced by manually operated diffuse reflectance fiber optic probes
SPIE Photonics West 2015, Biophotonics (BiOS), Optical Elastography and Tissue Biomechanics II, 7-12 Feb, San Francisco CA, USA, K.V. Larin, D.D. Sampson (Eds.), 9327:932717-1-6, 2015
[doi: 10.1117/12.2077190]

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Peter Naglic, Maksimilijan Bregar, Franjo Pernus, Bostjan Likar and Miran Buermen
Accuracy of experimental data and Monte Carlo simulation lookup table-based inverse models for assessment of turbid media optical properties with diffuse reflectance spectroscopy
SPIE Photonics West 2015, Biophotonics (BiOS), Biomedical Applications of Light Scattering IX, 7-12 Feb, San Francisco CA, USA, A. Wax, V. Backman (Eds.), 9333:933310-1-9, 2015
[doi: 10.1117/12.2078257]

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
An improved shape-constrained deformable model for segmentation of vertebrae from CT lumbar spine images
Proceedings of the Workshop on Computational Methods and Clinical Applications for Spine Imaging held at the 17th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2014, Lecture Notes in Computational Vision and Biomechanics 20:85-94, 2015
[doi: 10.1007/978-3-319-14148-0_8]

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Dejan Knez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Automated pedicle screw size and trajectory planning by maximization of fastening strength
Proceedings of the 3rd MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI2015, T. Vrtovec et al. (Eds.), Oct 5, Munich, Germany, 3-13, 2015

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Gregor Podrekar, Blaz Bratanic, Bostjan Likar, Franjo Pernus and Dejan Tomazevic
Automated visual inspection of pharmaceutical tablets in heavily cluttered dynamic environments
Proceedings of the 14th IASP International Conference on Machine Vision Applications - IAPR MVA 2015, 206-209, 2015
[doi: 10.1109/MVA.2015.7153168]

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Tim Jerman, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Beyond Frangi: an improved multiscale vesselness filter
SPIE Medical Imaging 2015, Image Processing, 21-26 Feb, Orlando FL, USA, S. Ourselin, M.A. Styner (Eds.), 9413:94132A-1-11, 2015
[doi: 10.1117/12.2081147]

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Tim Jerman, Alfiia Galimzianova, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Combining unsupervised and supervised methods for lesion segmentation
Proceedings of the MICCAI Brain Lesions (Brainles) Workshop, 5 Oct, Munich, Germany, 2015

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Tim Jerman, Franjo Pernus, Bostjan Likar and Ziga Spiclin
Computer-aided detection and quantification of intracranial aneurysms
Proceedings of the 18th International Conference on Medical Image Computing and Computer Assisted Intervention, N. Navab et al. (Eds.), 5-9 Oct, Munich, Germany, Lecture Notes in Computer Science 9350:3-10, 2015
[doi: 10.1007/978-3-319-24571-3_1]

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Deformable model-based segmentation of intervertebral discs from MR spine images by using the SSC descriptor
Proceedings of the 3rd MICCAI Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI2015, T. Vrtovec et al. (Eds.), Oct 5, Munich, Germany, 111-118, 2015

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Hennadii Madan, Bostjan Likar, Franjo Pernus and Ziga Spiclin
Device and methods for gold standard registration of clinical 3D and 2D cerebral angiograms
SPIE Medical Imaging 2015, Image-Guided Procedures, 21-26 Feb, Orlando FL, USA, Z.R. Yaniv, R.J. Webster III (Eds.), 9415:94151G-1-10, 2015
[doi: 10.1117/12.2081908]

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Bulat Ibragimov, Robert Korez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Interpolation-based detection of lumbar vertebrae in CT spine images
Proceedings of the Workshop on Computational Methods and Clinical Applications for Spine Imaging held at the 17th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2014, Lecture Notes in Computational Vision and Biomechanics 20:73-84, 2015
[doi: 10.1007/978-3-319-14148-0_7]

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Interpolation-based shape-constrained deformable model approach for segmentation of vertebrae from CT spine images
Proceedings of the Workshop on Computational Methods and Clinical Applications for Spine Imaging held at the 17th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2014, Lecture Notes in Computational Vision and Biomechanics 20:235-240, 2015
[doi: 10.1007/978-3-319-14148-0_21]

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Alfiia Galimzianova, Ziga Lesjak, Bostjan Likar, Franjo Pernus and Ziga Spiclin
Locally-adaptive MR intensity models and MRF-based segmentation of multiple sclerosis lesions
SPIE Medical Imaging 2015, Image Processing, 21-26 Feb, Orlando FL, USA, S. Ourselin, M.A. Styner (Eds.), 9413:94133G-1-9, 2015
[doi: 10.1117/12.2081642]

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Jurij Jemec, Franjo Pernus, Bostjan Likar and Miran Buermen
On the response function separability of hyperspectral imaging systems
SPIE Defense + Security 2015, Algorithms and Technologies for Multispectral, Hyperspectral, and Ultraspectral Imagery XXI, 20-24 Apr, Baltimore MD, USA, M. Velez-Reyes, F.A. Kruse (Eds.), 9472-59, 2015

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Optimal reinforcement of training dataset in supervised landmark-based segmentation
SPIE Medical Imaging 2015, Image Processing, 21-26 Feb, Orlando FL, USA, S. Ourselin, M.A. Styner (Eds.), 9413:94132K-1-6, 2015
[doi: 10.1117/12.2082321]

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Blaz Bratanic, Bostjan Likar, Franjo Pernus and Dejan Tomazevic
Pose estimation of textureless objects in cluttered environments
Proceedings of the 14th IASP International Conference on Machine Vision Applications - IAPR MVA 2015, 134-137, 2015
[doi: 10.1109/MVA.2015.7153151]

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
An improved shape-constrained deformable model for segmentation of vertebrae from CT lumbar spine images
Proceedings of the 2nd MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI CSI 2014, 14 Sep, Boston, USA, J. Yao et al. (Eds.), 76-85, 2014

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Uros Mitrovic, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Automatic detection of misalignment in rigid 3D-2D registration
2nd International MICCAI Workshop on Clinical Image-Based Procedures: Translational Research in Medical Imaging - CLIP 2013, Sep 22, Nagoya, Japan, M. Erdt et al. (Eds.), Lecture Notes in Computer Science 8361:117-124, 2014
[doi: 10.1007/978-3-319-05666-1_15]

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Tim Jerman, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Blob enhancement filter for computer-aided diagnosis of cerebral aneurysms
Proceedings of the Joint MICCAI-Workshops on Computing and Visualization for Intravascular Imaging and Computer Assisted Stenting - MICCAI CVII-STENT 2014, 14 Sep, Boston, USA, S.-L. Lee et al. (Eds.), 14-21, 2014

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Jurij Jemec, Miran Buermen, Franjo Pernus and Bostjan Likar
Characterization and modeling of point spread function in push-broom hyperspectral imaging systems for spectral and spatial resolution enhancement
SPIE Photonics West 2014, Biophotonics (BiOS), Clinical Technologies and Systems, Design and Quality for Biomedical Technologies VI, 1-6 Feb, San Francisco CA, USA, R. Raghavachari, R. Liang (Eds.), 8936:893616, 2014
[doi: 10.1117/12.2040134]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Comparison of manual and computerized measurements of sagittal vertebral inclination in MR images
Proceedings of the Workshop on Computational Methods and Clinical Applications for Spine Imaging held at the 16th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2013, Lecture Notes in Computational Vision and Biomechanics 17:111-121, 2014
[doi: 10.1007/978-3-319-07269-2_10]

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Robert Korez, Darko Stern, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Determination of the intervertebral disc space from CT images of the lumbar spine
SPIE Medical Imaging 2014, Image Processing, 15-20 Feb, San Diego CA, USA, S. Ourselin, M.A. Styner (Eds.), 9034:90342Q, 2014
[doi: 10.1117/12.2043734]

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Ciril Bohak, Anze Sodja, Matija Marolt, Uros Mitrovic and Franjo Pernus
Fast segmentation, conversion and rendering of volumetric data using GPU
International Conference on Systems, Signals and Image Processing - IWSSIP 2014, 12-15 May, Dubrovnik, Croatia, 239-242, 2014

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Bulat Ibragimov, Robert Korez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Interpolation-based detection of lumbar vertebrae in CT spine images
Proceedings of the 2nd MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI CSI 2014, 14 Sep, Boston, USA, J. Yao et al. (Eds.), 65-75, 2014

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Robert Korez, Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Interpolation-based shape-constrained deformable model approach for segmentation of vertebrae from CT spine images
Proceedings of the 2nd MICCAI Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI CSI 2014, 14 Sep, Boston, USA, J. Yao et al. (Eds.), 208-213, 2014

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Andraz Mehle, Marko Bukovec, Franjo Pernus, Bostjan Likar and Dejan Tomazeviè
Print localization on transparent pharmaceutical capsules
19th Computer Vision Winter Workshop - CVWW 2014, 3-5 Feb, Køtiny, Czech Republic, J. Heller, Z. Kukelova (Eds.), 75-80, 2014

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Alfiia Galimzianova, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Robust mixture-parameter estimation for unsupervised segmentation of brain MR images
3rd International MICCAI Workshop on Medical Computer Vision: Large Data in Medical Imaging - MCV 2013, Sep 26, Nagoya, Japan, B. Menze et al. (Eds.), Lecture Notes in Computer Science 8331:84-94, 2014
[doi: 10.1007/978-3-319-05530-5_9]

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Segmentation of vertebrae from 3D spine images by applying concepts from transportation and game theories
Proceedings of the Workshop on Computational Methods and Clinical Applications for Spine Imaging held at the 16th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2013, Lecture Notes in Computational Vision and Biomechanics 17:3--14, 2014
[doi: 10.1007/978-3-319-07269-2_1]

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Ziga Lesjak, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Validation and comparison of intensity based methods for change detection in serial brain images
SPIE Medical Imaging 2014, Image Perception, Observer Performance, and Technology Assessment, 15-20 Feb, San Diego CA, USA, C.R. Mello-Thoms, M.A. Kupinski (Eds.), 9037:90371C, 2014
[doi: 10.1117/12.2043102]

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Alfiia Galimzianova, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Automated segmentation of MS lesions in brain MR images using localized trimmed-likelihood estimation
SPIE Medical Imaging 2013, Image Processing, 9-14 Feb, Lake Buena Vista FL, USA, S. Ourselin, D.R. Haynor (Eds.), 8669:86693E, 2013
[doi: 10.1117/12.2006381]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Comparison of manual and computerized measurements of sagittal vertebral inclination in MR images
Proceedings of MICCAI 2013 Workshop on Computational Methods and Clinical Applications for Spine Imaging - CSI 2013, Sep 26, Nagoya, Japan, Yao et al. (Eds.), 100-110, 2013

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Uros Mitrovic, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Evaluation of 3D-2D registration methods for registration of 3D-DSA and 2D-DSA cerebral images
SPIE Medical Imaging 2013, Image Processing, 9-14 Feb, Lake Buena Vista FL, USA, S. Ourselin, D.R. Haynor (Eds.), 8669:866931, 2013
[doi: 10.1117/12.2007009]

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Maksimilijan Bregar, Miran Buermen, Franjo Pernus and Bostjan Likar
Influence of the training scheme on the soft tissue classification by near infrared pressure induced spectral response
Advances in Optics for Biotechnology, Medicine and Surgery XIII, Jun 2-5, Lake Tahoe, California, USA, 2013

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Uros Mitrovic, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Method for 3D-2D registration of vascular images: application to 3D contrast agent flow visualization
1st International MICCAI Workshop on Clinical Image-Based Procedures: from Planning to Intervention - CLIP 2012, 5 Oct, Nice, France, K. Drechsler et al. (Eds.), Lecture Notes in Computer Science 7761:50-58, 2013
[doi: 10.1007/978-3-642-38079-2_7]

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Ciril Bohak, Simon Zagar, Anze Sodja, Peter Skrlj, Uros Mitrovic, Franjo Pernus and Matija Marolt
Neck veins: an interactive 3D visualization of head veins
Proceedings of the 4th International Conference World Usability Day Slovenia 2013, 25 Nov, Ljubljana, Slovenia, E. Stojmenova (Ed.), 64-66, 2013

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Blaz Cugmas, Maksimilijan Bregar, Miran Buermen, Franjo Pernus and Bostjan Likar
Quantification of the probe contact pressure effects on the soft tissue classification in in vivo near infrared spectroscopy
16th International Conference on Near Infrared Spectroscopy - NIR 2013, Jun 2-7, La Grande-Motte, France, 2013

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Darko Stern, Vesna Njagulj, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Quantitative vertebral morphometry in 3D
SPIE Medical Imaging 2013, Image Processing, 9-14 Feb, Lake Buena Vista FL, USA, S. Ourselin, D.R. Haynor (Eds.), 8669:86690F, 2013
[doi: 10.1117/12.2003646]

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Blaz Bratanic, Bostjan Likar, Franjo Pernus and Dejan Tomazevic
Real-time in-plane rotation estimation of pharmaceutical tablets: a feature based approach
13th IAPR International Conference on Machine Vision Applications - MVA 2013, 20-23 May, Kyoto, Japan, 423-426, 2013

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Segmentation of vertebrae from 3D spine images by applying concepts from transportation and game theories
Proceedings of MICCAI 2013 Workshop on Computational Methods and Clinical Applications for Spine Imaging - CSI 2013, Sep 26, Nagoya, Japan, Yao et al. (Eds.), 1-12, 2013

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Statistical shape representation with landmark clustering by solving the assignment problem
SPIE Medical Imaging 2013, Image Processing, 9-14 Feb, Lake Buena Vista FL, USA, S. Ourselin, D.R. Haynor (Eds.), 8669:86690E, 2013
[doi: 10.1117/12.2006176]

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Uros Mitrovic, Ziga Spiclin, Darko Stern, Primoz Markelj, Bostjan Likar, Zoran Milosevic and Franjo Pernus
3D-2D registration of cerebral angiograms based on vessel directions and intensity gradients
SPIE Medical Imaging 2012, Image Processing, 4-9 Feb, San Diego CA, USA, D.R. Haynor, S. Ourselin (Eds.), 8314:83141T, 2012
[doi: 10.1117/12.910904]

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Blaz Cugmas, Franjo Pernus and Bostjan Likar
Analysis of soft tissue near-infrared spectra under dynamic pressure effects
SPIE Photonics West 2012, Clinical Technologies and Systems, Optical Biopsy X, 21-26 Jan, San Francisco CA, USA, R.R. Alfano, S.G. Demos (Eds.), 8220:822007, 2012
[doi: 10.1117/12.908614]

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Bulat Ibragimov, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Automated measurement of anterior and posterior acetabular sector angles
SPIE Medical Imaging 2012, Computer-Aided Diagnosis, 4-9 Feb, San Diego CA, USA, B. van Ginneken, C.L. Novak (Eds.), 8315:83151U, 2012
[doi: 10.1117/12.910873]

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Matjaz Kosec, Miran Buermen, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Automated model-based calibration of imaging spectrographs
SPIE Photonics West 2012, Clinical Technologies and Systems, Design and Quality for Biomedical Technologies V, 21-26 Jan, San Francisco CA, USA, R. Raghavachari, R. Liang, J. Pfefer (Eds.), 8215:82150A, 2012
[doi: 10.1117/12.907780]

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Darko Stern, Miran Buermen, Vesna Njagulj, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Automatic measurement of vertebral body deformations in CT images based on a 3D parametric model
SPIE Medical Imaging 2012, Computer-Aided Diagnosis, 4-9 Feb, San Diego CA, USA, B. van Ginneken, C.L. Novak (Eds.), 8315:831510, 2012
[doi: 10.1117/12.911107]

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Ziga Spiclin, Miran Buermen, Franjo Pernus and Bostjan Likar
Characterization and modeling of the spatially and spectrally varying point-spread function in hyperspectral imaging systems for computational correction of axial optical aberrations
SPIE Photonics West 2012, Clinical Technologies and Systems, Design and Quality for Biomedical Technologies V, 21-26 Jan, San Francisco CA, USA, R. Raghavachari, R. Liang, J. Pfefer (Eds.), 8215:82150R, 2012
[doi: 10.1117/12.908619]

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Tomaz Vrtovec, Michiel M.A. Janssen, Franjo Pernus, René M. Castelein and Max A. Viergever
Computerized analysis of pelvic incidence from 3D images
SPIE Medical Imaging 2012, Image Processing, 4-9 Feb, San Diego CA, USA, D.R. Haynor, S. Ourselin (Eds.), 8314:83142G, 2012
[doi: 10.1117/12.910912]

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Peter Usenik, Miran Buermen, Ales Fidler, Franjo Pernus and Bostjan Likar
Evaluation of cross-polarized near-infrared hyperspectral imaging for early detection of dental caries
SPIE Photonics West 2012, Photonic Therapeutics and Diagnostics, Lasers in Dentistry XVIII, 21-26 Jan, San Francisco CA, USA, P. Rechmann, D. Fried (Eds.), 8208:82080G, 2012
[doi: 10.1117/12.908763]

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Miran Buermen, Ales Fidler, Franjo Pernus and Bostjan Likar
Hyperspectral laser-induced autofluorescence imaging of dental caries
SPIE Photonics West 2012, Photonic Therapeutics and Diagnostics, Lasers in Dentistry XVIII, 21-26 Jan, San Francisco CA, USA, P. Rechmann, D. Fried (Eds.), 8208:82080E, 2012
[doi: 10.1117/12.908670]

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Peter Usenik, Miran Buermen, Ales Fidler, Franjo Pernus and Bostjan Likar
Improved classification and visualization of healthy and pathological hard dental tissues by modeling specular reflections in NIR hyperspectral images
SPIE Medical Imaging 2012, Computer-Aided Diagnosis, 4-9 Feb, San Diego CA, USA, B. van Ginneken, C.L. Novak (Eds.), 8315:83152N, 2012
[doi: 10.1117/12.911623]

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Ziga Spiclin, Bostjan Likar and Franjo Pernus
Quad-tree based entropy estimator for fast and robust brain image registration
5th International Workshop on Biomedical Image Registration - WBIR 2012, 7-8 Jul, Nashville, TN, USA, B.M. Dawant, G.E. Christensen , J.M. Fitzpatrick, D. Rueckert (Eds.), Lecture Notes in Computer Science 7359:160-169, 2012
[doi: 10.1007/978-3-642-31340-0_17]

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Miran Buermen, Peter Usenik, Ales Fidler, Franjo Pernus and Bostjan Likar
A construction of standardized near infrared hyper-spectral teeth database: a first step in the development of reliable diagnostic tool for quantification and early detection of caries
SPIE Photonics West 2011, Dental Hard Tissue and Early Caries Imaging II, Lasers in Dentistry XVII, 22-27 Jan, San Francisco CA, USA, P. Rechmann, D. Fried (Eds.), 7884:78840E, 2011
[doi: 10.1117/12.875059]

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Nika Oman, Miha Mozina, Dejan Tomazeviè, Franjo Pernus and Bostjan Likar
A study of a visual inspection technique for in-process monitoring of coating of pharmaceutical pellets
IEEE International Conference on Industrial Technology - ICIT 2011, 14-16 Mar, Auburn AL, USA, 239-243, 2011
[doi: 10.1109/ICIT.2011.5754380]

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Peter Usenik, Miran Buermen, Tomaz Vrtovec, Ales Fidler, Franjo Pernus and Bostjan Likar
Automated classification and visualization of healthy and pathological dental tissues based on near-infrared hyper-spectral imaging
SPIE Medical Imaging 2011, Computer-Aided Diagnosis, 12-17 Feb, Lake Buena Vista FL, USA, R.M. Summers, B. van Ginneken (Eds.), 7963:796340, 2011
[doi: 10.1117/12.878264]

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Bulat Ibragimov, Bostjan Likar and Franjo Pernus
Boundary detection by linear programming with application to lung fields segmentation
SPIE Medical Imaging 2011, Image Processing, 12-17 Feb, Lake Buena Vista FL, USA, B.M. Dawant, D.R. Haynor (Eds.), 7962:796231, 2011
[doi: 10.1117/12.877705]

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Ziga Spiclin, Franjo Pernus and Bostjan Likar
Correction of axial optical aberrations in hyper-spectral imaging systems
SPIE Photonics West 2011, Hyperspectral Imaging Systems, Design and Quality for Biomedical Technologies IV, 22-27 Jan, San Francisco CA, USA, R. Raghavachari, R. Liang (Eds.), 7891:78910S, 2011
[doi: 10.1117/12.873180]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Determination of vertebral pose in 3D by minimization of vertebral asymmetry
SPIE Medical Imaging 2011, Image Processing, 12-17 Feb, Lake Buena Vista FL, USA, B.M. Dawant, D.R. Haynor (Eds.), 7962:79620F, 2011
[doi: 10.1117/12.877762]

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Uros Mitrovic, Primoz Markelj, Bostjan Likar, Zoran Milosevic and Franjo Pernus
Gradient-based 3D-2D registration of cerebral angiograms
SPIE Medical Imaging 2011, Image Processing, 12-17 Feb, Lake Buena Vista FL, USA, B.M. Dawant, D.R. Haynor (Eds.), 7962:79621P, 2011
[doi: doi:10.1117/12.877541]

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Ziga Spiclin, Peter Usenik, Miran Buermen, Ales Fidler, Franjo Pernus and Bostjan Likar
Groupwise consistent image registration: crucial step for the construction of a standardized near infrared hyper-spectral teeth database
SPIE Medical Imaging 2011, Image Processing, 12-17 Feb, Lake Buena Vista FL, USA, B.M. Dawant, D.R. Haynor (Eds.), 7962:79622A, 2011
[doi: 10.1117/12.877940]

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
Illumination system characterization for hyperspectral imaging
SPIE Photonics West 2011, Hyperspectral Imaging Systems, Design and Quality for Biomedical Technologies IV, 22-27 Jan, San Francisco CA, USA, R. Raghavachari, R. Liang (Eds.), 7891:78910T, 2011
[doi: 10.1117/12.873868]

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Ziga Spiclin, Bostjan Likar and Franjo Pernus
Information-theoretic multi-modal image registration based on the improved fast Gauss transform: application to brain images
1st International MICCAI Workshop on Multimodal Brain Image Analysis - MBIA 2011, 18 Sep, Toronto, ON, Canada, T. Liu et al. (Eds.), Lecture Notes in Computer Science 7012:135-142, 2011
[doi: 10.1007/978-3-642-24446-9_17]

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Miha Mozina, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Modelling imprints of pharmaceutical tablets for imprint quality visual inspection
15th International Conference on Image Processing, Computer Vision, and Pattern Recognition - IPCV 2011, 18-21 Jul, Las Vegas NV, USA, 934-940, 2011

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Miha Mozina, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Optical character verification of print on pharmaceutical capsules
12th IAPR Conference on Machine Vision Applications - MVA 2011, 13-15 Jun, Nara, Japan, K. Yamada (Ed.), 303-306, 2011

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Bulat Ibragimov, Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Segmentation of lung fields by game theory and dynamic programming
4th International Workshop on Pulmonary Image Analysis - PIA 2011, 18 Sep, Toronto, ON, Canada, 101-111, 2011

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Darko Stern, Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Segmentation of vertebral bodies in CT and MR images based on 3D deterministic models
SPIE Medical Imaging 2011, Image Processing, 12-17 Feb, Lake Buena Vista FL, USA, B.M. Dawant, D.R. Haynor (Eds.), 7962:79620D, 2011
[doi: 10.1117/12.877365]

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Supriyanto Pawiro, Primoz Markelj, Christelle Gendrin, Michael Figl, Markus Stock, Christoph Bloch, Christoph Weber, Ewald Unger, Iris Noebauer, Franz Kainberger, Helga Bergmeister, Dietmar Georg, Helmar Bergmann and Wolfgang Birkfellner
A new gold-standard dataset for 2D/3D image registration evaluation
SPIE Medical Imaging 2010, Visualization, Image-Guided Procedures, and Modeling, 13-18 Feb, San Diego CA, USA, K.H. Wong, M.I. Miga (Eds.), 7625:76251V, 2010
[doi: 10.1117/12.844488]

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Primoz Markelj, Bostjan Likar and Franjo Pernus
A new image database for 3D/2D registration based on the Visible Human data set
4th International Workshop on Biomedical Image Registration - WBIR 2010, 11-13 Jul, Luebeck, Germany, Lecture Notes in Computer Science 6204:151-160, 2010
[doi: 10.1007/978-3-642-14366-3_14]

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Miran Buermen, Franjo Pernus and Bostjan Likar
A practical approach to spectral calibration of short wavelength infrared hyper-spectral imaging systems
SPIE Photonics West 2010, Progress in Biomedical Optics and Imaging, Design and Quality for Biomedical Technologies III, 23-28 Jan, San Francisco CA, USA, R. Raghavachari, R. Liang (Eds.), 7556:755614, 2010
[doi: 10.1117/12.841866]

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Darko Stern, Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Automated determination of the centers of vertebral bodies and intervertebral discs in CT and MR lumbar spine images
SPIE Medical Imaging 2010, Image Processing, 13-18 Feb, San Diego CA, USA, B.M. Dawant, D.R. Haynor (Eds.), 7623:762350, 2010
[doi: 10.1117/12.844567]

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Peter Usenik, Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Automated tracking of vesicles in phase contrast microscopy images
20th IAPR International Conference on Pattern Recognition - ICPR 2010, 23-26 Aug, Istanbul, Turkey, 2520-2523, 2010
[doi: 10.1109/ICPR.2010.617]

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Miran Buermen, Miha Mozina, Franjo Pernus and Bostjan Likar
Coating film thickness of pharmaceutical pellets measured by near infrared spectroscopy
IEEE International Conference on Industrial Technology - ICIT 2010, 14-17 Mar, Viña del Mar, Chile, 199-204, 2010
[doi: 10.1109/ICIT.2010.5472679]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Evaluation of manual and computerized methods for the determination of axial vertebral rotation
SPIE Medical Imaging 2010, Image Processing, 13-18 Feb, San Diego CA, USA, B.M. Dawant, D.R. Haynor (Eds.), 7623:76234W, 2010
[doi: 10.1117/12.843528]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Evaluation of sagittal vertebral rotation in CT images by manual and automated methods
2010 IEEE Symposium on Biomedical Imaging: From Nano to Macro - ISBI 2010, 14-17 Apr, Rotterdam, The Netherlands, 412-415, 2010
[doi: 10.1109/ISBI.2010.5490323]

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Ziga Spiclin, Jaka Katrasnik, Miran Buermen, Franjo Pernus and Bostjan Likar
Geometrical calibration of an AOTF hyper-spectral imaging system
SPIE Photonics West 2010, Progress in Biomedical Optics and Imaging, Design and Quality for Biomedical Technologies III, 23-28 Jan, San Francisco CA, USA, R. Raghavachari, R. Liang (Eds.), 7556:75560I, 2010
[doi: 10.1117/12.841727]

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Ziga Spiclin, Bostjan Likar and Franjo Pernus
Real-time print localization on pharmaceutical capsules for automatic visual inspection
IEEE International Conference on Industrial Technology - ICIT 2010, 14-17 Mar, Viña del Mar, Chile, 279-284, 2010
[doi: 10.1109/ICIT.2010.5472693]

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Darko Stern, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Segmentation of vertebral bodies in MR images based on geometrical models in 3D
5th International Workshop on Medical Imaging and Augmented Reality - MIAR 2010, 19-20 Sep, Beijing, China, H. Liao, P.J. Edwards, X. Pan, Y. Fan, G.-Z. Yang (Eds.), Lecture Notes in Computer Science 6326:419-428, 2010
[doi: 10.1007/978-3-642-15699-1_44 ]

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
Spectral characterization and calibration of AOTF spectrometers and hyper-spectral imaging system
SPIE Photonics West 2010, Progress in Biomedical Optics and Imaging, Design and Quality for Biomedical Technologies III, 23-28 Jan, San Francisco CA, USA, R. Raghavachari, R. Liang (Eds.), 7556:75560H, 2010
[doi: 10.1117/12.840633]

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Christelle Gendrin, Jakob Spoerk, Christoph Bloch, Supriyanto Pawiro, Christoph Weber, Michael Figl, Primoz Markelj, Franjo Pernus, Dietmar Georg, Helmar Bergmann and Wolfgang Birkfellner
Towards real-time 2D/3D registration for organ motion monitoring in image-guided radiation therapy
SPIE Medical Imaging 2010, Visualization, Image-Guided Procedures, and Modeling, 13-18 Feb, San Diego CA, USA, K.H. Wong, M.I. Miga (Eds.), 7625:762512, 2010
[doi: 10.1117/12.844201]

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Miha Mozina, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Visual imaging as a process analytical technology tool for the understanding and on-line monitoring of pellet coating process
IEEE International Conference on Industrial Technology - ICIT 2010, 14-17 Mar, Viña del Mar, Chile, 1088-1093, 2010
[doi: 10.1109/ICIT.2010.5472576]

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Primoz Markelj, Franjo Pernus and Bostjan Likar
A tool for registration verification based on gradient correspondence
SPIE Medical Imaging 2009, Image Processing, 7-12 Feb, Lake Buena Vista FL, USA, J.P.W. Pluim, B.M. Dawant (Eds.), 7259:725937, 2009
[doi: 10.1117/12.812349]

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Darko Stern, Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Automated determination of spinal centerline in CT and MR images
SPIE Medical Imaging 2009, Image Processing, 7-12 Feb, Lake Buena Vista FL, USA, J.P.W. Pluim, B.M. Dawant (Eds.), 7259:72594M, 2009
[doi: 10.1117/12.811150]

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Miha Mozina, Miran Buermen, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Automatic visual inspection of pharmaceutical pellets in coating process
IEEE International Conference on Industrial Technology - ICIT 2009, 10-13 Feb, Churchill, Victoria, Australia, 2009
[doi: 10.1109/ICIT.2009.4939618]

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Jaka Katrasnik, Miran Buermen, Franjo Pernus and Bostjan Likar
Contrast enhancement of subcutaneous blood vessel images by means of visible and near-infrared hyper-spectral imaging
SPIE Medical Imaging 2009, Image Processing, 7-12 Feb, Lake Buena Vista FL, USA, J.P.W. Pluim, B.M. Dawant (Eds.), 7259:725927, 2009
[doi: 10.1117/12.812438]

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Miran Buermen, Franjo Pernus and Bostjan Likar
High speed precision weighing of pharmaceutical capsules
IEEE International Conference on Industrial Technology - ICIT 2009, 10-13 Feb, Churchill, Victoria, Australia, 2009
[doi: 10.1109/ICIT.2009.4939620]

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Primoz Markelj, Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Registration of 3D pre-interventional to 2D intra-interventional medical images
World Congress on Medical Physics and Biomedical Engineering 2009, 7-12 Sep, Munich, Germany, IFMBE Proceedings: Image Processing, Biosignal Processing, Modelling and Simulation, Biomechanics, O. Doessel, W.C. Schlegel (Eds.), 25/4:1924–1927, 2009
[doi: 10.1007/978-3-642-03882-2]

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Ziga Spiclin, Bostjan Likar and Franjo Pernus
Registration of EEG electrode positions to PET and fMRI images
SPIE Medical Imaging 2009, Image Processing, 7-12 Feb, Lake Buena Vista FL, USA, J.P.W. Pluim, B.M. Dawant (Eds.), 7259:72592J, 2009
[doi: 10.1117/12.811892]

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Miran Buermen, Franjo Pernus and Bostjan Likar
Simulator for assessing the performance of polychromatic LED light sources
SPIE Photonics West 2009, Integrated Optoelectronic Devices (OPTO), Light-Emitting Diodes: Materials, Devices, and Applications for Solid State Lighting XIII, 24-29 Jan, San Jose CA, USA, K.P Streubel, H. Jeon, L.-W. Tu (Eds.), 7231:72311F, 2009
[doi: 10.1117/12.810054]

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Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
A symmetry-based method for the determination of vertebral rotation in 3D
11th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008, 6-10 Sep, New York, USA, D. Metaxas et al. (Eds.), Springer, Lecture Notes in Computer Science 5241:942-950, 2008
[doi: 10.1007/978-3-540-85988-8_112]

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Ziga Spiclin, Arne Hans, Frank Duffy, Simon Warfield, Bostjan Likar and Franjo Pernus
EEG to MRI registration based on global and local similarities of MRI intensity distributions
11th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008, 6-10 Sep, New York, USA, D. Metaxas et al. (Eds.), Springer, Lecture Notes in Computer Science 5241:762-770, 2008
[doi: 10.1007/978-3-540-85988-8_91]

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Tomaz Vrtovec
Modality-independent determination of vertebral position and rotation in 3D
4th International Workshop on Medical Imaging and Augmented Reality - MIAR 2008, 1-2 Aug, Tokyo, Japan, T. Dohi, I. Sakuma, H. Liao (Eds.), Springer, Lecture Notes in Computer Science 5128:89-97, 2008
[doi: 10.1007/978-3-540-79982-5_10]

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
New robot for power line inspection
IEEE International Conference on Robotics, Automation and Mechatronics - RAM 2008, 21-24 Sep, Chengdu, China, 1195-1200, 2008
[doi: 10.1109/RAMECH.2008.4681335]

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Primoz Markelj, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Robust 3D/2D registration of CT and MR to X-ray images based on gradient reconstruction
22nd International Congress and Exhibition on Computer Assisted Radiology and Surgery - CARS 2008, 25-28 Jun, Barcelona, Spain, H.U. Lemke et al. (Eds.), Springer, 3:S102, 2008

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Miran Buermen, Franjo Pernus and Bostjan Likar
Smart LED light source driver for machine vision system
SPIE Photonics West 2008, Integrated Optoelectronic Devices (OPTO), Light-Emitting Diodes: Research, Manufacturing, and Applications XII, 19-24 Jan, San Jose CA, USA, K.P Streubel, H.J. Jeon (Eds.), 6910:69100U, 2008
[doi: 10.1117/12.764630]

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
3D/2D image registration: The impact of X-ray views and their number
10th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 29 Oct - 2 Nov, Brisbane, Australia, N. Ayache, S. Ourselin, A. Maeder (Eds.), Springer, Lecture Notes in Computer Science 4791:450-457, 2007
[doi: 10.1007/978-3-540-75757-3_55]

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Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Determination of 3D location and rotation of lumbar vertebrae in CT images by symmetry-based auto-registration
SPIE Medical Imaging 2007, Image Processing, 17-22 Feb, San Diego CA, USA, J.P.W. Pluim, J.M. Reinhardt (Eds.), 6512:65121Q, 2007
[doi: 10.1117/12.710580]

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Marko Bukovec, Ziga Spiclin, Franjo Pernus and Bostjan Likar
Geometrical and statistical visual inspection of imprinted tablets
10th IAPR Conference on Machine Vision Applications - MVA 2007, 16-18 May, Tokyo, Japan, 412-415, 2007

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Ziga Spiclin, Marko Bukovec, Franjo Pernus and Bostjan Likar
Matching images of imprinted tablets
12th IEEE International Conference on Emerging Technologies and Factory Automation - ETFA 2007, 25-28 Sep, Patras, Greece., 916-919, 2007
[doi: 10.1109/EFTA.2007.4416881]
[IF: 5.561; 3/87 radiology, nuclear medicine & medical imaging; 1st quartile]

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Primoz Markelj, Dejan Tomazevic, Franjo Pernus and Bostjan Likar
Optimizing bone extraction in MR images for 3D/2D gradient based registration of MR and X-ray images
SPIE Medical Imaging 2007, Image Processing, 17-22 Feb, San Diego CA, USA, J.P.W. Pluim, J.M. Reinhardt (Eds.), 5612:651224-1, 2007
[doi: 10.1117/12.709259]

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Miran Buermen, Franjo Pernus and Bostjan Likar
Prediction of intensity and color degradation of LEDs
SPIE Photonics West 2007, Integrated Optoelectronic Devices (OPTO), Light-Emitting Diodes: Research, Manufacturing, and Applications XI, 20-25 Jan, San Jose CA, USA, K.P Streubel, H. Jeon (Eds.), 6486:64860M, 2007
[doi: 10.1117/12.698987]

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Miran Buermen, Franjo Pernus and Bostjan Likar
Quality assurance of light-emitting diodes
11th International Symposium on the Science and Technology of Light Sources - Light Sources 2007, 20-24 May, Shanghai, China, M.Q. Liu, R. Devonshire (Eds.), 609-610, 2007

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Darko Skerl, Bostjan Likar and Franjo Pernus
Evaluation of similarity measures for 3D/2D image registration
SPIE Medical Imaging 2006, Image Processing, 11-16 Feb, San Diego CA, USA, J.M. Reinhardt, J.P.W. Pluim (Eds.), 6144, 2006
[doi: 10.1117/12.652088]

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Darko Skerl, Bostjan Likar and Franjo Pernus
Evaluation of similarity measures for non-rigid registration
3rd International Workshop on Biomedical Image Registration - WBIR 2006, 9-11 Jul, Utrecht, The Netherlands, J.P.W. Pluim, B. Likar, F.A. Gerritsen (Eds.), Springer, Lecture Notes in Computer Science 4057:160-168, 2006
[doi: 10.1007/11784012_20]

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Tomaz Vrtovec, Sébastien Ourselin, Lavier Gomes, Bostjan Likar and Franjo Pernus
Generation of curved planar reformations from magnetic resonance images of the spine
9th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2006, 1-6 Oct, Copenhagen, Denmark, R. Larsen, M. Nielsen, J. Sporring (Eds.), Springer, Lecture Notes in Computer Science 4191:135-143, 2006
[doi: 10.1007/11866763_17]

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Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Curved planar reformation of CT spine data
SPIE Medical Imaging 2005, Image Processing, 13-17 Feb, San Diego CA, USA, J.M. Fitzpatrick, J.M. Reinhardt (Eds.), 5747:1446-1456, 2005
[doi: 10.1117/12.595113]

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Reconstruction-based 3D/2D image registration
8th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005, 26-30 Oct, Palm Springs CA, USA, J. Duncan, G Gerig (Eds.), Springer, Lecture Notes in Computer Science 3750:231-238, 2005
[doi: 10.1007/11566489_29]

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Uros Vovk, Franjo Pernus and Bostjan Likar
Simultaneous correction of intensity inhomogeneity in multi-channel MR images
27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society EMBC '05, 1-4 Sep, Shanghai, China, 2005
[doi: 10.1109/IEMBS.2005.1615413]

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Tomaz Vrtovec, Bostjan Likar and Franjo Pernus
Spine-based coordinate system
27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society EMBC '05, 1-4 Sep, Shanghai, China, 2005
[doi: 10.1109/IEMBS.2005.1615629]

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Tomaz Vrtovec, Bostjan Likar, Dejan Tomazevic and Franjo Pernus
Automated robust generation of compact 3D statistical shape models
SPIE Medical Imaging 2004, Image Processing, 16-19 Feb, San Diego CA, USA, J.M. Fitzpatrick, M. Sonka (Eds.), 5370:1312-1323, 2004
[doi: 10.1117/12.533470]

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Darko Skerl, Bostjan Likar and Franjo Pernus
Evaluation of nine similarity measures used in rigid registration
17th International Conference on Pattern Recognition - ICPR 2004, 23-26 Aug, Cambridge, UK, J. Kittler, M. Petrou, M. Nikon, E.R. Hancock (Eds.), 794-797, 2004
[doi: 10.1109/ICPR.2004.1334648]

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Marko Bukovec, Roel Truyen, Bostjan Likar, Rok Bernard and Franjo Pernus
Image segmentation by connected parametrical models
SPIE Medical Imaging 2004, Image Processing, 16-19 Feb, San Diego CA, USA, J.M. Fitzpatrick, M. Sonka (Eds.), 5370:398-409, 2004
[doi: 10.1117/12.533629]

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Uros Vovk, Franjo Pernus and Bostjan Likar
Multi-feature intesity inhomogeneity correction in MR images
7th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2004, 26-30 Sep, Rennes Saint-Malo, France, C. Barillot, D.R. Haynor, P. Hellier (Eds.), Springer, Lecture Notes in Computer Science 3217:283-290, 2004
[doi: 10.1007/b100265]

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Multi-feature mutual information
SPIE Medical Imaging 2004, Image Processing, 16-19 Feb, San Diego CA, USA, J.M. Fitzpatrick, M. Sonka (Eds.), 5370:143-154, 2004
[doi: 10.1117/12.531007]

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Mario Medved, Roel Truyen, Bostjan Likar and Franjo Pernus
Segmentation and segment connection of obstructed colon
SPIE Medical Imaging 2004, Image Processing, 16-19 Feb, San Diego CA, USA, J.M. Fitzpatrick, M. Sonka (Eds.), 5370:467-474, 2004
[doi: 10.1117/12.533665]

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Darko Skerl, Bostjan Likar, Rok Bernard and Franjo Pernus
A protocol for optimization-independent similarity measure evaluation
2nd International Workshop on Biomedical Image Registration - WBIR 2003, 23-24 Jun, Philadelphia PA, USA, J.C. Gee, J.B.A. Maintz, M.W. Vannier (Eds.), Springer, Lecture Notes in Computer Science 2717:330-338, 2003
[doi: 10.1007/b11804]

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Uros Vovk, Franjo Pernus and Bostjan Likar
Correction of multi-spectral MRI intensity non-uniformity via spatially regularized feature condensing
SPIE Medical imaging 2003, Image Processing, 17-20 Feb, San Diego CA, USA, M. Sonka, J.M. Fitzpatrick (Eds.), 5032:788-794, 2003
[doi: 10.1117/12.480182]

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Uros Vovk, Franjo Pernus and Bostjan Likar
Retrospective correction of MR intensity inhomogeneity via regularised feature condensing
8th Computer Vision Winter Workshop - CVWW 2003, 3-6 Feb, Valtice, Czech Republic, O. Drbohlav (Ed.), 165-168, 2003

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Tomaz Vrtovec, Dejan Tomazeviè, Bostjan Likar and Franjo Pernus
Statistical deformable model of a lumbar vertebra
8th Computer Vision Winter Workshop - CVWW 2003, 3-6 Feb, Valtice, Czech Republic, O. Drbohlav (Ed.), 91-96, 2003

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Validation data for 2D/3D registration of medical images
8th Computer Vision Winter Workshop - CVWW 2003, 3-6 Feb, Valtice, Czech Republic, O. Drbohlav (Ed.), 15-19, 2003

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Gold standard 2D/3D registration of X-ray to CT and MR images
5th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2002, 25-28 Sep, Tokyo, Japan, T. Dohi, R. Kikinis (Eds.), Springer, Lecture Notes in Computer Science 2489:461-468, 2002
[doi: 10.1007/3-540-45787-9_58]

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Franjo Pernus, Rihard Karba, Rok Bernard, Joze Derganc and Bostjan Likar
Machine vision in Slovenia
Korea-Slovenia Joint Symposium on Intelligent Systems - COEX 2002, 26 May, Seoul, Korea, 58-61, 2002

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Joze Derganc, Bostjan Likar and Franjo Pernus
Non-parametric segemntation of multi-spectral MR images incorporating spatial and intensity information
SPIE Medical Imaging 2002, Image Processing, 24-28 Feb, San Diego CA, USA, M. Sonka, J.M. Fitzpatrick (Eds.), 4684:391-400, 2002
[doi: 10.1117/12.467181]

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Uros Vovk, Franjo Pernus and Bostjan Likar
Retrospective correction of MR intensity inhomogeneity via regularised feature condensing
11. Elektrotehniska in racunalniska konferenca - ERK 2002, 23-25 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:271-274, 2002

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Rigid 2D/3D registration of intraoperative digital X-ray images and preoperative CT and MR images
SPIE Medical Imaging 2002, Image Processing, 24-28 Feb, San Diego CA, USA, M. Sonka, J.M. Fitzpatrick (Eds.), 4684:507-517, 2002
[doi: 10.1117/12.467193]

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Joze Derganc, Bostjan Likar and Franjo Pernus
Segmentation-based correction of spectral inhomogeneities in color images
7th Computer Vision Winter Workshop - CVWW 2002, 4-7 Feb, Bad Aussee, Austria, H. Wildenauer, W. Kropatsch (Eds.), 178-187, 2002

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Bostjan Likar, Joze Derganc and Franjo Pernus
Segmentation-based retrospective correction of intensity non-uniformity in multi-spectral MR images
SPIE Medical Imaging 2002, Image Processing, 24-28 Feb, San Diego CA, USA, M. Sonka, J.M. Fitzpatrick (Eds.), 4684:1531-1540, 2002
[doi: 10.1117/12.467120]

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Rok Bernard, Bostjan Likar and Franjo Pernus
Statistical model-based segmentation of articulated structures
7th Computer Vision Winter Workshop - CVWW 2002, 4-7 Feb, Bad Aussee, Austria, H. Wildenauer, W. Kropatsch (Eds.) , 169-177, 2002

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Joze Derganc, Bostjan Likar, Rok Bernard, Dejan Tomazevic and Franjo Pernus
Automated visual inspection of color tablets in pharmaceutical blisters
5th International Conference on Quality Control By Artificial Vision - QCAV 2001, 21-23 May, Le Creusot, France, 2:415-420, 2001

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Darko Skerl, Shiyan Pan, Rui Li, Michael J. Fitzpatrick, Mitchell H. Parks, Peter R. Martin, Victoria L. Morgan and Benoit M. Dawant
Correction of geometric distortions in EP images using non-rigid registration to corresponding anatomic images
SPIE Medical Imaging 2001, Image Processing, 19-22 Feb, San Diego CA, USA, M. Sonka, K.M. Hanson (Eds.), 4322:58-68, 2001
[doi: 10.1117/12.431140]

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Gradient-based registration of 3D MR and 2D X-ray images
15th Computed Assisted Radiology and Surgery - CARS 2001, 27-20 Jun, Berlin, Germany, H.U. Lemke (Ed.), 327-332, 2001

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Joze Derganc, Bostjan Likar, Rok Bernard, Dejan Tomazevic and Franjo Pernus
Machine vision system for quality control of color tablets in pharmaceutical blisters
10. Elektrotehniska in racunalniska konferenca - ERK 2001, 24-26 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:305-308, 2001

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Registration of MR and X-ray images
6th Computer Vision Winter Workshop - CVWW 2001, 7-9 Feb, Bled, Slovenia, B. Likar (Ed.), 92-103, 2001

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Joze Derganc, Bostjan Likar and Franjo Pernus
Segmentation of shaded color images by non-parametric analysis of feature space
6th Computer Vision Winter Workshop - CVWW 2001, 7-9 Feb, Bled, Slovenia, B. Likar (Ed.), 13-24, 2001

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Rok Bernard, Bostjan Likar and Franjo Pernus
Segmenting articulated structures by hierarchical statistical modeling of shape, appearance, and topology
4th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2001, 14-17 Oct, Utrecht, The Netherlands, W.J. Niessen, M.A. Viergever (Eds.), Springer, Lecture Notes in Computer Science 2208:499-506, 2001
[doi: 10.1007/3-540-45468-3_60]

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Joze Derganc, Bostjan Likar and Franjo Pernus
Shading correction and segmentation of color images
2nd IEEE R8-EURASIP Symposium on Image and Signal Processing and Analysis - ISPA 2001, 19-21 Jun, Pula, Croatia, S. Lonèariæ, H. Babiæ (Eds.), 345-350, 2001

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Jerneja Gros, France Mihelic, Nikola Pavesic, Mario Zganec, Ales Mihelic, Marko Knez, Ales Mercun and Darko Skerl
The phonetic SMS reader
4th International Conference on Text, Speech and Dialogue, V. Matousek et al. (Eds.), Springer, Lecture Notes in Artificial Intelligence 2166:334-340, 2001

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
A comparison of retrospective shading correction techniques
15th International Conference on Pattern Recognition - ICPR 2000, 3-7 Sep, Barcelona, Spain, A. Sanfeliu (Ed.), 3:568-571, 2000
[doi: 10.1109/ICPR.2000.903608]

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Joze Derganc and Franjo Pernus
A machine vision system for inspecting bearings
Czech Pattern Recognition Workshop - CPRW 2000, 2-4 Feb, Perslak, Czech Republic, T. Svoboda (Ed.), 161-166, 2000

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Joze Derganc and Franjo Pernus
A machine vision system for inspecting bearings
15th International Conference on Pattern Recognition - ICPR 2000, 3-7 Sep, Barcelona, Spain, A. Sanfeliu (Ed.), 4:752-755, 2000
[doi: 10.1109/ICPR.2000.903026]

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Dejan Stojakovic and Franjo Pernus
Blister inspection by principal component analysis
9. Elektrotehniska in racunalniska konferenca - ERK 2000, 21-23 Sep, Portoroz, Slovenia, B. Zajc (Ed.), 249-252, 2000

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Joze Derganc and Franjo Pernus
Color image segmentation by nonparametric analysis of feature space
9. Elektrotehniska in racunalniska konferenca - ERK 2000, 21-23 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:197-2000, 2000

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Bostjan Likar, J.B. Antoine Maintz, Max A. Viergever and Franjo Pernus
Correction of intensity variations by entropy minimization
SPIE Medical Imaging 2000, Image Processing, 14-17 Feb, San Diego CA, USA, K.M. Hanson (Ed.), 3979:1350-1361, 2000
[doi: 10.1117/12.387645]

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Bostjan Likar and Franjo Pernus
Information-theoretic correction of MR intensity inhomogeneity
9. Elektrotehniska in racunalniska konferenca - ERK 2000, 21-23 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:221-224, 2000

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Bostjan Simunic, Bostjan Likar, Vojko Valencic and Franjo Pernus
Inhomogeneity correction of MR images by homomorphic filtering
9. Elektrotehniska in racunalniska konferenca - ERK 2000, 21-23 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:225-228, 2000

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Matevz Mutec, Jurij F. Tasic, Bostjan Likar and Franjo Pernus
Normalization of MR image intensities
9. Elektrotehniska in racunalniska konferenca - ERK 2000, 21-23 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:229-232, 2000

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Bostjan Likar, Max A. Viergever and Franjo Pernus
Retrospective correction of MR intensity inhomogeneity by information minimization
3rd International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2000, 11-14 Oct, Pittsburgh PA, USA, S.L. Delp, A.M. DiGioia, B. Jaramaz (Eds.), Springer, Lecture Notes in Computer Science 1935:375-384, 2000
[doi: 10.1007/b12345]

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Bostjan Likar and Franjo Pernus
Retrospective shading correction of microscopical images
Czech Pattern Recognition Workshop - CPRW 2000, 2-4 Feb, Perslak, Czech Republic, T. Svoboda (Ed.), 5-14, 2000

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Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Retrospective shading correction: problem, methods and evaluation
Czech Pattern Recognition Workshop - CPRW 2000, 2-4 Feb, Perslak, Czech Republic, T. Svoboda (Ed.), 15-20, 2000

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Marko Bukovec, Jozef Casar and Dejan Gradisar
Control and supervision of a modular production line
5th International, Cultural and Academic Meeting of Engineering Students proceedings - ICAMES'99, 15-21 May, Istanbul, Turkey, 1999, 113-142, 1999

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Bostjan Likar and Franjo Pernus
Elastic registration of muscle fibres
International Workshop on Biomedical Image Registration - WBIR 1999, Aug, Bled, Slovenia, F. Pernus, S. Kovacic, H.S. Stiehl, M.A. Viergever (Eds.) , 24-45, 1999

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Joze Derganc and Franjo Pernus
Kontrola kvalitete injekcijskih igel z racunalniskim vidom
8. Elektrotehniska in racunalniska konferenca - ERK 1999, 23-25 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:261-264, 1999

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Bostjan Likar and Franjo Pernus
Matching images of muscle fibres
4th Computer Vision Winter Workshop - CVWW 1999, 8-10 Feb, Rastenfeld, Austria, N. Braendle (Ed.), 90-101, 1999

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Ales Klemencic, Stansilav Kovacic and Franjo Pernus
Modeling morphological changes during contraction of muscle fibres by active contours
8th International Conference on Computer Analysis of Images and Patterns - CAIP'99, 1-3 Sep, Ljubljana, Slovenia, F. Solina and A. Leonardis (Eds.), Lecture Notes in Computer Science 1689:134-141, 1999
[doi: 10.1007/3-540-48375-6_17]

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Bostjan Likar and Franjo Pernus
Automated point-based registration of medical images
3rd Computer Vision Winter Workshop - CVWW 1998, 9-12 Feb, Gozd Martuljek, Slovenia, A. Leonardis, F. Solina (Eds.), 147-156, 1998

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Andrej Krasna, Dejan Tomazevic, Bostjan Likar and Franjo Pernus
Automatic measurement of inhibition zones
7. Elektrotehniska in racunalniska konferenca - ERK 1998, 24-26 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:293-296, 1998

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Jani Pusenjak, Tadej Kotnik, Bostjan Likar and Franjo Pernus
Image registration by the cepstrum technique
7. Elektrotehniska in racunalniska konferenca - ERK 1998, 24-26 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:243-246, 1998

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Joze Derganc and Franjo Pernus
Integrirani sistemi z racunalniskim vidom - kontrola kvalitete lezajev elektricnega stevca
7. Elektrotehniska in racunalniska konferenca - ERK 1998, 24-26 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:285-288, 1998

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Janez Zaletelj, Bostjan Likar, Jurij F. Tasic and Franjo Pernus
Nonlinear diffusion filtering for point-based image registration
7. Elektrotehniska in racunalniska konferenca - ERK 1998, 24-26 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:257-260, 1998

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Bostjan Likar and Franjo Pernus
Point-based medical image matching: an automatic algorithm for point extraction
SPIE Medical Imaging 1998, Image Processing, 23-26 Feb, San Diego CA, USA, K.M. Hanson (Ed.), 3338:1186-1197, 1998
[doi: 10.1117/12.310846]

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Rok Bernard, Bostjan Likar, Damijan Miklavcic and Franjo Pernus
A computer vision system for counting cell colonies
Computer-Aided Data Analysis in Medicine - CADAM 1997, 12 Nov, Bled, Slovenia, I. Kononenko, T. Urbanèiè (Eds.), 37-45, 1997

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Bostjan Likar, Franc Solina and Franjo Pernus
Automatic image registration by optimising the parameters of the registration model
6. Elektrotehniska in racunalniska konferenca - ERK 1997, 25-27 Sep, Portoroz, Slovenia, B. Zajc (Ed.), B:227-280, 1997

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Franjo Pernus, Ales Leonardis and Stanislav Kovacic
Planning multiple views for 3-D object recognition and pose determination
7th International Conference on Computer Analysis of Images and Patterns - CAIP'97, 10-12 Sep, Kiel, Germany, G. Sommer, K. Daniilidis, J. Paul (Eds.), Lecture Notes in Computer Science 1296:424-431, 1997
[doi: 10.1007/3-540-63460-6_146]

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Bostjan Likar, Rok Bernard and Franjo Pernus
Contrast matching techniques for digital subtraction radiography: An objective evaluation
1996 AMIA Annual Fall Symposium, 26-30 Oct, Washington DC, USA, J.J. Cimino (Ed.) , 294-298, 1996

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Bostjan Likar and Franjo Pernus
Quantification of marginal bone changes by computer-aided analysis of radiographs
4. elektrotehniska in raèunalniska konferenca - ERK 1995, 25-27 Sep, Portoroz, Slovenija, B. Zajc (Ed.), B:337-340, 1995

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Rob C. Brink, Ludvig Vavruch, Tom P.C. Schloesser, Kasim Abul-Kasim, Acke Ohlin, Hans Tropp, René M. Castelein and Tomaz Vrtovec
Three-dimensional pelvic incidence is much higher in (thoraco)lumbar scoliosis than in thoracic scoliosis and controls
Meeting of the Nordic Spinal Deformities Society - NSDS 2017, Aug 24-26, Stockholm, Sweden, 2017

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Janez Mohar, Dejan Knez, Robert J. Cirman, Rihard Trebse, Rene Mihalic and Tomaz Vrtovec
Comparison of automatically and manually obtained pedicle screw plans in deformities of the thoracic spine
29th Annual Congress of the International Society for Technology in Arthoplasty - ISTA 2016, 5 - 8 Oct, Boston MA, USA, S.B. Murphy (Ed.), #4334, 2016

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Bulat Ibragimov, Franjo Pernus, Primoz Strojan and Lei Xing
TH-CD-206-05: Machine-learning based segmentation of organs at risks for head and neck radiotherapy planning
Medical Physics, 43(6):3883, 2016
[doi: 10.1118/1.4958186]
[IF: 2.617 (2016); 37/126 radiology, nuclear medicine & medical imaging; 2nd quartile]

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Miha Vodicar, Robert Kosak, Matevz Gorensek, Robert Korez, Tomaz Vrtovec, Jadran Koder and Rok Vengust
Does vertebral end plate perforation cause annulus reparation and intervertebral space restoration? A pilot randomized controlled trial
Proceedings of the 16th Annual Congress of the European Federation of National Associations of Orthopaedics and Traumatology - EFORT 2015, 27-29 May, Prague, Czech Republic, #2757, 2015

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Ziga Lesjak, Alfiia Galimzianova, Bostjan Likar, Franjo Pernus and Ziga Spiclin
Increased accuracy and reproducibility of MS lesion volume quantification by using publicly available BrainSeg3D image analysis software
Multiple Sclerosis Journal, 21(Suppl. 11):500-501, 2015
[doi: 10.1177/1352458515602642]
[IF: 4.671 (2015); 27/192 clinical neurology; 1st quartile]

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Miha Vodicar, Robert Kosak, Matevz Gorencek, Robert Korez, Tomaz Vrtovec, Jadran Koder and Rok Vengust
Intervertebral space restoration after lumbar discectomy: is vertebral end plate perforation the answer? (P80)
European Spine Journal, 24(Suppl 6):S743-S800, 2015
[doi: 10.1007/s00586-015-4131-7]
[IF: 2.132 (2015); 24/74 orthopedics; 2nd quartile]

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David Martincic, Miha Brojan, Franc Kosel, Darko Stern, Tomaz Vrtovec and Rok Vengust
Optimal cement volume for vertebroplasty – biomechanical study
Proceedings of the 16th Annual Congress of the European Federation of National Associations of Orthopaedics and Traumatology - EFORT 2015, 27-29 May, Prague, Czech Republic, #1780, 2015

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Tom P.C. Schloesser, Michiel M.A. Janssen, Tomaz Vrtovec, Franjo Pernus, F. Cumhur OEner, Max A. Viergever, Koen L. Vincken and René M. Castelein
EPOS 33rd Annual Meeting: The development of the ischio-iliac lordosis during growth as an essential adaptation towards human bipedalism and a determinant of sagittal balance (OP46)
Journal of Childrens Orthopaedics, 8(Suppl 1):S7-S54, 2014
[doi: 10.1007/s11832-014-0573-4]

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Tom P.C. Schloesser, Michiel M.A. Janssen, Tomaz Vrtovec, Franjo Pernus, F. Cumhur OEner, Max A. Viergever, Koen L. Vincken and René M. Castelein
Eurospine 2014: The development of the ischio-iliac lordosis during growth as an essential adaptation towards human bipedalism and a determinant of sagittal balance (OP53)
European Spine Journal, 23(Suppl 5):S469-S496, 2014
[doi: 10.1007/s00586-014-3515-4]
[IF: 2.066 (2014); 23/72 orthopedics; 1st quartile]

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Maksimilijan Bregar, Miran Buermen, Blaz Cugmas, Franjo Pernus and Bostjan Likar
Spectral-contact-pressure planes of skin in vivo and ex vivo
Proceedings of the Gordon Research Conference on Lasers in Medicine & Biology: from Basic Science Discovery to Translational Applications, 13-18 Jul, Holderness, NH, USA, 2014

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Ziga Lesjak, Ziga Spiclin, Bostjan Likar and Franjo Pernus
Avtomatska zaznava casovno pogojenih morfoloskih sprememb v MR slikah glave
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 8. strokovna konferenca - ROSUS 2013, 21. marec, Maribor, Slovenija, B. Potoènik (ur.), 65-71, 2013

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Jurij Jemec, Miran Buermen, Bostjan Likar and Franjo Pernus
Modeli sirjenja svetlobe v opticno gostih medijih in njihova uporaba pri dolocanju opticnih lastnosti
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 8. strokovna konferenca - ROSUS 2013, 21. marec, Maribor, Slovenija, B. Potoènik (ur.), 58-64, 2013

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Robert Korez, Bostjan Likar, Franjo Pernus and Tomaz Vrtovec
Razgradnja medicinskih slik hrbtenice
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 8. strokovna konferenca - ROSUS 2013, 21. marec, Maribor, Slovenija, B. Potoènik (ur.), 72-79, 2013

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Michiel M.A. Janssen, Koen L. Vincken, S.M. Van Raak, Tomaz Vrtovec, Bastiaan Kemp, Max A. Viergever, Lambertus W. Bartels and René M. Castelein
EuroSpine 2012: Sagittal spinal profile and spinopelvic balance in parents of scoliotic children, as compared to normal controls (O195)
European Spine Journal, 21(Suppl 3):S269-S337, 2012
[doi: 10.1007/s00586-012-2269-0]
[IF: 2.133 (2012); 19/65 orthopedics; 2nd quartile]

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David Martincic, Miha Brojan, Franc Kosel, Darko Stern, Tomaz Vrtovec and Rok Vengust
Optimal cement volume for vertebroplasty - biomechanical study
Annual Spine Experts Group Meeting & Slovenia 2012 Spine Symposium, 29-30 Nov, Ljubljana, Slovenia, 28, 2012

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Michiel M.A. Janssen, Koen L. Vincken, Tomaz Vrtovec, Bastiaan Kemp, Max A. Viergever, Lambertus W. Bartels and René M. Castelein
Sagittal spinal profile and spinopelvic balance in parents of scoliotic children, as compared to normal controls
19th International Meeting on Advanced Spine Techniques - IMAST 2012, 18-21 Jul, Istanbul, Turkey, 2012

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Michiel M.A. Janssen, Koen L. Vincken, S.M. Van Raak, Tomaz Vrtovec, Bastiaan Kemp, Max A. Viergever, Lambertus W. Bartels and René M. Castelein
Sagittal spinal profile and spinopelvic balance in parents of scoliotic children, as compared to normal controls
SpineWeek 2012, 28 May - 1 Jun, Amsterdam, the Netherlands, 2012

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Michiel M.A. Janssen, Tomaz Vrtovec, Franjo Pernus, F. Cumhur OEner, Evie E. Vereecke, Anthony J. Channon, Max A. Viergever, Koen L. Vincken and René M. Castelein
The pelvic lordosis: an essential adaptation in human evolution, and a determinant of spinopelvic alignment
19th International Meeting on Advanced Spine Techniques - IMAST 2012, 18-21 Jul, Istanbul, Turkey, 2012

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Gregor Podrekar
Kamera-projektor sistem za neinvazivno opazovanje ven
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 6. strokovna konferenca - ROSUS 2011, 17. marec, Maribor, Slovenija, B. Potoènik (ur.), 92-98, 2011

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Tomaz Vrtovec, Michiel M.A. Janssen, Franjo Pernus, René M. Castelein and Max A. Viergever
Pelvic incidence: analysis in three dimensions
11th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery - CAOS 2011, 15-18 Jun, London, UK, J.P. Cobb (Ed.), 2011

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Blaz Cugmas, Franjo Pernus and Bostjan Likar
Prvi koraki k vpeljavi NIR spektroskopije in hiperspekteralnega slikanja v veterinarsko medicino
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 6. strokovna konferenca - ROSUS 2011, 17. marec, Maribor, Slovenija, B. Potoènik (ur.), 67-74, 2011

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Matjaz Kosec, Dejan Tomazeviè, Franjo Pernus and Bostjan Likar
Analiza NIR hiperspektralnih slik
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 5. strokovna konferenca - ROSUS 2010, 18. marec, Maribor, Slovenija, B. Potoènik (ur.), 53-60, 2010

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Peter Usenik, Tomaz Vrtovec, Franjo Pernus and Bostjan Likar
Sledenje oblik fosfolipidnih veziklov zajetih s fazno kontrastno mikroskopijo
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 5. strokovna konferenca - ROSUS 2010, 18. marec, Maribor, Slovenija, B. Potoènik (ur.), 94-100, 2010

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Tomaz Vrtovec, Rok Vengust, Bostjan Likar and Franjo Pernus
Symmetry of vertebral structures: can it be used to measure axial vertebral rotation?
Slovenia 2010 Spine Symposium, 9-10 Apr, Ljubljana, Slovenia, 73, 2010

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
Near-infrared imaging of subcutaneous veins
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 4. strokovna konferenca - ROSUS 2009, 19. marec, Maribor, Slovenija, B. Potoènik (ur.), 2009

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Bostjan Likar
Medical image analysis
Slovenski veterinarski zbornik - Slovenian Veterinary Research, 44(1-2):42, 2007

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Ziga Spiclin, Marko Bukovec, Franjo Pernus and Bostjan Likar
Poravnava slik za vizualno kontrolo kakovosti
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 2. strokovna konferenca - ROSUS 2007, 22. marec, Maribor, Slovenija, B. Potoènik (ur.), 55-64, 2007

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Marko Bukovec, Ziga Spiclin, Franjo Pernus and Bostjan Likar
Vizualna kontrola kakovosti vtisnjenih farmacevtskih tablet
Raèunalniska obdelava slik in njena uporaba v Sloveniji - 2. strokovna konferenca - ROSUS 2007, 22. marec, Maribor, Slovenija, B. Potoènik (ur.), 65-74, 2007

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Bostjan Likar
Retrospective shading correction
Life Sciences 2000, 28 Sep- 1 Oct, Gozd Martuljek, Slovenia, I. Erzen, D. Stiblar-Martinèiè (Eds.), 24, 2000

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Ales Fidler, Bostjan Likar, Franjo Pernus and Uros Skaleric
The effect of developer exhaustion on the accuracy of digital subtraction radiography
11th Slovenian Paradontological Days 2000, Terme Èatez, Slovenia, 10, 2000

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Ales Fidler, Bostjan Likar and Uros Skaleric
Quantitative DSR accuracy is influenced by film exhaustion
7th Meeting of the International Academy of Periodontology with the Slovenian Society of Periodontology, 20-22 Jun, Ljubljana, Slovenia, 29, 1999

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Bostjan Likar, Rok Bernard and Franjo Pernus
Automatic extractions of point pairs for matching 2D medical images
World Congress on Medical Physics and Biomedical Engineering : XVIII International Conference on Medical and Biological Engineering and XI International Conference on Medical Physics 1997, 14-19 Sep, Nice, France , 35:713, 1997

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Bostjan Likar and Franjo Pernus
Image registration by thin-plate splines
3rd International Conference on Life Sciences 1996, 21-26 Sep, Gozd Martuljek,Slovenia, I. Erzen, Z. Pajer (Eds.) , 18-18, 1996

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Bostjan Likar and Franjo Pernus
Quantification of alveolar bone loss by digital subtraction radiography
3rd Annual Conference of EAVDI and IVRA 1995, 6-10 Sep, Berlin, Germany, 166, 1996

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Bostjan Likar and Franjo Pernus
Thin-plate splines as a registration technique for digital subtraction radiography
4th Symposium on Digital Imaging in Dental Radiography 1996, 17-19 Oct, Amsterdam, The Netherlands , 21, 1996

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Bostjan Likar and Franjo Pernus
Diagnosis of periodontitis by digital subtraction radiography
2nd International Conference on Life Sciences 1995, 23-28 Sep, Gozd Martuljek, Slovenia, S. Ribariè, R. Zorec (Eds.) , 51, 1995

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Bulat Ibragimov and Tomaz Vrtovec
Landmark-based statistical shape representations
Chapter 4 of the book Statistical Shape and Deformation Analysis (Academic Press, Elsevier), 89-113, 2017
[doi: 10.1016/B978-0-12-810493-4.00005-5]

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Tomaz Vrtovec
Automated determination of the spine-based coordinate system for an efficient cross-sectional visualization of 3D spine images
Chapter 8 of the book "Spinal Imaging and Image Analysis", S. Li, J. Yao (Eds.), Springer, Lecture Notes in Computational Vision and Biomechanics 18:231-299, 2015
[doi: 10.1007/978-3-319-12508-4_8]

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Tomaz Vrtovec
Teorija linearnih sistemov: izpitne naloge z resitvami
Zalozba FE in FRI, ISBN 978-961-243-188-4, 2011

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Jaka Katrasnik, Franjo Pernus and Bostjan Likar
A climbing-flying robot for power line inspection
Chapter 6 of the book "Climbing and Walking Robots", B. Miripour (Ed.), ISBN: 978-953-307-030-8, InTech, 95-109, 2010

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Bostjan Likar
Biomedicinska slikovna informatika in diagnostika
Zalozba FE in FRI, ISBN 978-961-243-096-2, 2008

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Tomaz Vrtovec and Bostjan Likar
Teorija linearnih sistemov: reseni primeri in vaje
Zalozba FE in FRI, ISBN 978-961-243-076-4, 2007

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Franjo Pernus and Ludvik Gyergyék
Zbirka resenih nalog iz teorije vezij in sistemov
Akademska zalozba, 1992

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Tomaz Vrtovec
Evaluation of spinal and pelvic parameters from three-dimensional medical images
Utrecht University, the Netherlands, 2011

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Michiel M.A. Janssen, Koen L. Vincken, S.M. Van Raak, Tomaz Vrtovec, Bastiaan Kemp, Max A. Viergever, Lambertus W. Bartels and René M. Castelein
Sagittal spinal profile and spinopelvic balance in parents of scoliotic children, as compared to normal controls
Studies in Health Technology and Informatics, 176:463, 2012

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Michiel M.A. Janssen, Tomaz Vrtovec, Franjo Pernus, F. Cumhur OEner, Evie E. Vereecke, Anthony J. Channon, Max A. Viergever, Koen L. Vincken and René M. Castelein
The pelvic lordosis: an essential adaptation in human evolution, and a determinant of spinopelvic alignment
Studies in Health Technology and Informatics, 176:462, 2012

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Ales Fidler and Bostjan Likar
Constant compression ratio does not assure image detail preservation
Caries Research, 43(1):81-82, 2009
[doi: 10.1159/000201595]
[IF: 2.462 (2009); 8/64 dentistry, oral surgery and medicine; 1st quartile]

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Bostjan Likar and Josien P.W. Pluim
The Third International Workshop on Biomedical Image Registration – WBIR 2006 (Editorial)
Medical Image Analysis, 12(1):1-2, 2008
[doi: 10.1016/j.media.2007.07.006]
[IF: 3.602 (2008); 4/98 computer science, interdisciplinary applications; 1st quartile]

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Ales Fidler, Bostjan Likar and Helmut R. Ringl
What is wrong with compression ratio in lossy image compression?
Radiology, 245(1):299-300, 2007
[doi: 10.1148/radiol.2451062005]
[IF: 5.561 (2007); 3/87 radiology, nuclear medicine and medical imaging; 1st quartile]

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